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  • Negative cofitness for Rru_A0960 from Rhodospirillum rubrum S1H

    AmpD (negative regulator of AmpC) (NCBI)
    SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
    KEGG: N-acetylmuramoyl-L-alanine amidase

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A0104 Alpha-2-macroglobulin-like protein (NCBI) -0.79
    2 Rru_A0571 hypothetical protein (NCBI) -0.76
    3 Rru_A3670 Potassium efflux system protein (NCBI) -0.72
    4 Rru_A1111 Pseudouridine synthase, RluD (NCBI) -0.70
    5 Rru_A2035 phosphate binding protein, putative (NCBI) -0.69
    6 Rru_A1045 hypothetical protein (NCBI) -0.69
    7 Rru_A0679 Transcriptional Regulator, TetR family (NCBI) -0.69
    8 Rru_A2619 Deoxyxylulose-5-phosphate synthase (NCBI) -0.68
    9 Rru_A1768 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) -0.68
    10 Rru_A0107 MSHA biogenesis protein MshM (NCBI) -0.68
    11 Rru_A2620 Hemolysin A (NCBI) -0.65
    12 Rru_A1829 Transcriptional Regulator, MucR family (NCBI) -0.65
    13 Rru_A0484 hypothetical protein (NCBI) -0.64
    14 Rru_A2009 Glycerol kinase (NCBI) -0.63
    15 Rru_A1409 L-lactate permease (NCBI) -0.62
    16 Rru_A2353 Tetratricopeptide TPR_4 (NCBI) -0.61
    17 Rru_A0105 Penicillin-binding protein 1C (NCBI) -0.60
    18 Rru_A3256 Protein of unknown function DUF218 (NCBI) -0.59
    19 Rru_A0142 Putative cyclase (NCBI) -0.59
    20 Rru_A0602 Phosphate uptake regulator, PhoU (NCBI) -0.58

    Or look for positive cofitness