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  • Negative cofitness for Rru_A0860 from Rhodospirillum rubrum S1H

    RND efflux system, outer membrane lipoprotein, NodT (NCBI)
    SEED: Outer membrane component of tripartite multidrug resistance system

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A1712 chemotaxis sensory transducer (NCBI) -0.63
    2 Rru_A3587 hypothetical protein (NCBI) -0.58
    3 Rru_A1988 GCN5-related N-acetyltransferase (NCBI) -0.58
    4 Rru_A1400 CheW protein (NCBI) -0.57
    5 Rru_A0028 Beta-lactamase-like (NCBI) -0.56
    6 Rru_A2299 inner-membrane translocator (NCBI) -0.55
    7 Rru_A3032 hypothetical protein (NCBI) -0.55
    8 Rru_B0012 DNA polymerase, beta-like region (NCBI) -0.52
    9 Rru_A3024 Prolyl 4-hydroxylase, alpha subunit (NCBI) -0.52
    10 Rru_A3220 TonB-dependent receptor (NCBI) -0.52
    11 Rru_A0724 Protein of unknown function DUF1365 (NCBI) -0.51
    12 Rru_A2076 chemotaxis sensory transducer (NCBI) -0.51
    13 Rru_A0350 Helix-turn-helix protein, CopG (NCBI) -0.51
    14 Rru_B0018 Protein of unknown function DUF161 (NCBI) -0.50
    15 Rru_A0323 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) -0.50
    16 Rru_A2542 circadian clock protein KaiC (NCBI) -0.49
    17 Rru_A1790 ABC-2 transporter component (NCBI) -0.48
    18 Rru_A2863 Transcriptional Regulator, TetR family (NCBI) -0.48
    19 Rru_A0306 Hydrogenase formation HypD protein (NCBI) -0.48
    20 Rru_A0261 hypothetical protein (NCBI) -0.48

    Or look for positive cofitness