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  • Negative cofitness for Rru_A0647 from Rhodospirillum rubrum S1H

    Pyridoxal-5'-phosphate-dependent enzyme, beta subunit (NCBI)
    SEED: Threonine dehydratase, catabolic (EC 4.3.1.19)
    KEGG: threonine dehydratase

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A0991 Protein of unknown function UPF0126 (NCBI) -0.62
    2 Rru_A1017 Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) -0.62
    3 Rru_A1300 N-formylglutamate deformylase (NCBI) -0.61
    4 Rru_A1749 ABC transporter component (NCBI) -0.61
    5 Rru_A0372 hypothetical protein (NCBI) -0.58
    6 Rru_A1018 extracellular solute-binding protein, family 1 (NCBI) -0.58
    7 Rru_A3528 hypothetical protein (NCBI) -0.57
    8 Rru_A3195 Helix-turn-helix protein, CopG (NCBI) -0.54
    9 Rru_A2153 TonB-like (NCBI) -0.53
    10 Rru_A3691 Transport-associated (NCBI) -0.52
    11 Rru_A2919 hypothetical protein (NCBI) -0.52
    12 Rru_A2786 inner-membrane translocator (NCBI) -0.52
    13 Rru_A0884 Putative FecR (NCBI) -0.51
    14 Rru_A0232 hypothetical protein (NCBI) -0.51
    15 Rru_A1419 Carboxylyase-related protein (NCBI) -0.51
    16 Rru_A1777 Beta-N-acetylhexosaminidase (NCBI) -0.51
    17 Rru_A1302 Formiminoglutamate deiminase (NCBI) -0.50
    18 Rru_A0371 Double-transmembrane region-like (NCBI) -0.50
    19 Rru_A1047 6-phosphofructokinase (NCBI) -0.49
    20 Rru_A2548 hypothetical protein (NCBI) -0.49

    Or look for positive cofitness