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  • Negative cofitness for Rru_A0575 from Rhodospirillum rubrum S1H

    Peptidase U62, modulator of DNA gyrase (NCBI)
    SEED: TldE protein, part of TldE/TldD proteolytic complex
    KEGG: PmbA protein

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A3418 Transcriptional Regulator, TetR family (NCBI) -0.66
    2 Rru_A0597 Protein of unknown function DUF1526 (NCBI) -0.62
    3 Rru_A1494 hypothetical protein (NCBI) -0.60
    4 Rru_A3305 ABC transporter component (NCBI) -0.60
    5 Rru_A3203 ribonuclease R (NCBI) -0.58
    6 Rru_A3157 hypothetical protein (NCBI) -0.57
    7 Rru_A0088 Zinc-containing alcohol dehydrogenase superfamily (NCBI) -0.57
    8 Rru_A1279 Asparagine synthase (NCBI) -0.57
    9 Rru_A3360 Electron transport protein SCO1/SenC (NCBI) -0.56
    10 Rru_A0314 NADH dehydrogenase (quinone) (NCBI) -0.56
    11 Rru_A0745 PTSINtr with GAF domain, PtsP (NCBI) -0.55
    12 Rru_A1791 ABC-2 transporter component (NCBI) -0.55
    13 Rru_A0960 AmpD (negative regulator of AmpC) (NCBI) -0.55
    14 Rru_A1031 Ethanolamine ammonia-lyase (NCBI) -0.55
    15 Rru_A3252 dTDP-glucose 4,6-dehydratase (NCBI) -0.53
    16 Rru_A2766 Protein of unknown function DUF329 (NCBI) -0.53
    17 Rru_A0202 Phospholipase D/Transphosphatidylase (NCBI) -0.53
    18 Rru_A0477 hypothetical protein (NCBI) -0.53
    19 Rru_A3750 hypothetical protein (NCBI) -0.53
    20 Rru_A1614 hypothetical protein (NCBI) -0.53

    Or look for positive cofitness