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  • Negative cofitness for Rru_A0567 from Rhodospirillum rubrum S1H

    Peptidase U62, modulator of DNA gyrase (NCBI)
    SEED: TldD protein, part of TldE/TldD proteolytic complex
    KEGG: TldD protein

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A0934 hypothetical protein (NCBI) -0.57
    2 Rru_A0477 hypothetical protein (NCBI) -0.57
    3 Rru_A3360 Electron transport protein SCO1/SenC (NCBI) -0.56
    4 Rru_A3203 ribonuclease R (NCBI) -0.55
    5 Rru_A1279 Asparagine synthase (NCBI) -0.54
    6 Rru_A0152 hypothetical protein (NCBI) -0.54
    7 Rru_A2520 Penicillin-binding protein 1A (NCBI) -0.53
    8 Rru_A3011 Isochorismatase hydrolase (NCBI) -0.53
    9 Rru_A3132 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain (NCBI) -0.53
    10 Rru_A0314 NADH dehydrogenase (quinone) (NCBI) -0.52
    11 Rru_A0902 Peptidase C56, PfpI (NCBI) -0.52
    12 Rru_A3129 ABC-2 transporter component (NCBI) -0.52
    13 Rru_A0243 tRNA/rRNA cytosine-C5-methylase (NCBI) -0.50
    14 Rru_A1810 hypothetical protein (NCBI) -0.50
    15 Rru_A1037 Amidohydrolase (NCBI) -0.49
    16 Rru_A3489 hypothetical protein (NCBI) -0.49
    17 Rru_A0745 PTSINtr with GAF domain, PtsP (NCBI) -0.49
    18 Rru_A0273 Acetoacetyl-CoA reductase (NCBI) -0.48
    19 Rru_A1024 phage repressor (NCBI) -0.48
    20 Rru_A2311 Transcriptional Regulator, IclR family (NCBI) -0.48

    Or look for positive cofitness