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  • Negative cofitness for Rru_A0488 from Rhodospirillum rubrum S1H

    TonB-dependent receptor (NCBI)
    SEED: FIG00505639: hypothetical protein
    KEGG: iron complex outermembrane recepter protein

    Computing cofitness values with 60 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 Rru_A3484 Secretion protein HlyD (NCBI) -0.68
    2 Rru_A1500 Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI) -0.67
    3 Rru_A3602 Smr protein/MutS2-like (NCBI) -0.64
    4 Rru_A1131 Aminotransferase, class IV (NCBI) -0.63
    5 Rru_A3724 ABC transporter component (NCBI) -0.60
    6 Rru_A1719 Thioesterase superfamily (NCBI) -0.60
    7 Rru_A1177 chemotaxis sensory transducer (NCBI) -0.60
    8 Rru_A0535 Protein of unknown function DUF6, transmembrane (NCBI) -0.60
    9 Rru_A1791 ABC-2 transporter component (NCBI) -0.59
    10 Rru_A2714 hypothetical protein (NCBI) -0.58
    11 Rru_A2843 hypothetical protein (NCBI) -0.58
    12 Rru_A0323 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) -0.57
    13 Rru_A3033 hypothetical protein (NCBI) -0.56
    14 Rru_A2254 hypothetical protein (NCBI) -0.56
    15 Rru_A3750 hypothetical protein (NCBI) -0.56
    16 Rru_A0383 SH3 domain protein (NCBI) -0.55
    17 Rru_A3591 hypothetical protein (NCBI) -0.55
    18 Rru_A0631 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) -0.54
    19 Rru_A0013 hypothetical protein (NCBI) -0.54
    20 Rru_A3466 Ornithine aminotransferase (NCBI) -0.53

    Or look for positive cofitness