Conservation of cofitness between HER17_RS19620 and HER17_RS08950 in Pectobacterium carotovorum WPP14
12 genomes with putative orthologs of both genes
| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS19620 | | type I-E CRISPR-associated protein Cse1/CasA | 1.0 | HER17_RS08950 | | L,D-transpeptidase family protein | 0.59 | 19 |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS01860 | | type I-E CRISPR-associated protein Cse1/CasA | 0.71 | DZA65_RS13280 | | L,D-transpeptidase family protein | low | > 75 |
| Dickeya dianthicola 67-19 | 0.54 | HGI48_RS01805 | | type I-E CRISPR-associated protein Cse1/CasA | 0.71 | HGI48_RS12815 | | L,D-transpeptidase family protein | low | > 71 |
| Escherichia coli ECOR27 | 0.45 | NOLOHH_12215 | casA | type I-E CRISPR-associated protein Cse1/CasA | 0.55 | NOLOHH_21000 | ldtC | L,D-transpeptidase LdtC | low | > 75 |
| Escherichia coli ECRC102 | 0.45 | NIAGMN_18170 | casA | type I-E CRISPR-associated protein Cse1/CasA | 0.55 | NIAGMN_24355 | ldtC | L,D-transpeptidase LdtC | — | — |
| Escherichia coli ECRC98 | 0.45 | JDDGAC_24065 | casA | type I-E CRISPR-associated protein Cse1/CasA | 0.55 | JDDGAC_07135 | ldtC | L,D-transpeptidase LdtC | low | > 86 |
| Escherichia coli ECRC100 | 0.45 | OKFHMN_20400 | casA | type I-E CRISPR-associated protein Cse1/CasA | 0.55 | OKFHMN_03475 | ldtC | L,D-transpeptidase LdtC | low | > 80 |
| Escherichia coli ECRC99 | 0.45 | KEDOAH_07740 | casA | type I-E CRISPR-associated protein Cse1/CasA | 0.55 | KEDOAH_24280 | ldtC | L,D-transpeptidase LdtC | — | — |
| Escherichia coli ECRC101 | 0.45 | MCAODC_10925 | casA | type I-E CRISPR-associated protein Cse1/CasA | 0.55 | MCAODC_22835 | ldtC | L,D-transpeptidase LdtC | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.43 | GFF4814 | | CRISPR-associated protein, Cse1 family | 0.55 | GFF3396 | | L,D-transpeptidase YcfS | low | > 78 |
| Escherichia coli ECRC62 | 0.43 | BNILDI_10765 | casA | type I-E CRISPR-associated protein Cse1/CasA | 0.55 | BNILDI_19165 | ldtC | L,D-transpeptidase LdtC | low | > 75 |
| Klebsiella michiganensis M5al | 0.41 | BWI76_RS22745 | | type I-E CRISPR-associated protein Cse1/CasA | 0.55 | BWI76_RS11200 | | transpeptidase | low | > 92 |
| Dickeya dadantii 3937 | 0.36 | DDA3937_RS01860 | | type I-E CRISPR-associated protein Cse1/CasA | 0.71 | DDA3937_RS12750 | | L,D-transpeptidase family protein | low | > 74 |
Not shown: 3 genomes with orthologs for HER17_RS19620 only; 27 genomes with orthologs for HER17_RS08950 only