Conservation of cofitness between ECD_02709 and ECD_03111 in Escherichia coli BL21

12 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02709 putative selenium-dependent hydroxylase accessory protein 1.0 ECD_03111 targeting factor for csrBC sRNA degradation 0.55 4
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00839 hypothetical protein 1.00 OHPLBJKB_00453 RNase E specificity factor CsrD 0.51 59
Escherichia coli BW25113 0.98 b2876 b2876 orf, hypothetical protein (VIMSS) 1.00 b3252 yhdA conserved inner membrane protein (NCBI) low > 76
Escherichia coli ECOR27 0.98 NOLOHH_11590 yqeC selenium cofactor biosynthesis protein YqeC 1.00 NOLOHH_09505 csrD RNase E specificity factor CsrD low > 75
Escherichia coli ECRC62 0.98 BNILDI_10115 yqeC selenium cofactor biosynthesis protein YqeC 1.00 BNILDI_02015 csrD RNase E specificity factor CsrD low > 75
Escherichia coli ECOR38 0.97 HEPCGN_18950 yqeC selenium cofactor biosynthesis protein YqeC 0.99 HEPCGN_16585 csrD RNase E specificity factor CsrD low > 87
Escherichia coli ECRC98 0.97 JDDGAC_23305 yqeC selenium cofactor biosynthesis protein YqeC 1.00 JDDGAC_21345 csrD RNase E specificity factor CsrD low > 86
Escherichia coli ECRC101 0.97 MCAODC_10185 yqeC selenium cofactor biosynthesis protein YqeC 1.00 MCAODC_08240 csrD RNase E specificity factor CsrD low > 87
Escherichia coli ECRC99 0.97 KEDOAH_08470 yqeC selenium cofactor biosynthesis protein YqeC 1.00 KEDOAH_10430 csrD RNase E specificity factor CsrD — —
Escherichia coli ECRC102 0.97 NIAGMN_17430 yqeC selenium cofactor biosynthesis protein YqeC 1.00 NIAGMN_15480 csrD RNase E specificity factor CsrD — —
Escherichia coli ECRC100 0.97 OKFHMN_19660 yqeC selenium cofactor biosynthesis protein YqeC 1.00 OKFHMN_17720 csrD RNase E specificity factor CsrD low > 80
Escherichia coli Nissle 1917 0.95 ECOLIN_RS16030 selenium cofactor biosynthesis protein YqeC 0.98 ECOLIN_RS18635 RNase E specificity factor CsrD low > 55
Escherichia fergusonii Becca 0.95 EFB2_01025 hypothetical protein 0.98 EFB2_00579 RNase E specificity factor CsrD low > 86

Not shown: 0 genomes with orthologs for ECD_02709 only; 20 genomes with orthologs for ECD_03111 only