Conservation of cofitness between ECD_03636 and ECD_02471 in Escherichia coli BL21

12 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03636 D-ribose ABC transporter permease 1.0 ECD_02471 putative DNA-binding transcriptional regulator 0.47 8
Escherichia coli ECRC98 1.00 JDDGAC_18360 rbsC ribose ABC transporter permease 0.97 JDDGAC_25020 yfiE Uncharacterized HTH-type transcriptional regulator YfiE low > 86
Escherichia coli ECRC101 1.00 MCAODC_05245 rbsC ribose ABC transporter permease 0.97 MCAODC_11885 yfiE Uncharacterized HTH-type transcriptional regulator YfiE low > 87
Escherichia coli ECRC102 1.00 NIAGMN_12495 rbsC ribose ABC transporter permease 0.97 NIAGMN_19125 yfiE Uncharacterized HTH-type transcriptional regulator YfiE — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21560 ribose ABC transporter permease 0.98 ECOLIN_RS14585 LysR family transcriptional regulator — —
Escherichia coli ECRC62 1.00 BNILDI_04650 rbsC ribose ABC transporter permease 0.97 BNILDI_11830 yfiE Uncharacterized HTH-type transcriptional regulator YfiE low > 75
Escherichia coli ECRC100 1.00 OKFHMN_14740 rbsC ribose ABC transporter permease 0.97 OKFHMN_21355 yfiE Uncharacterized HTH-type transcriptional regulator YfiE low > 80
Escherichia coli ECOR27 1.00 NOLOHH_06875 rbsC ribose ABC transporter permease 0.99 NOLOHH_13025 yfiE Uncharacterized HTH-type transcriptional regulator YfiE low > 75
Escherichia fergusonii Becca 1.00 EFB2_04883 Ribose import permease protein RbsC 0.98 EFB2_01319 HTH-type transcriptional activator CmpR low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04303 Ribose import permease protein RbsC 1.00 OHPLBJKB_01129 HTH-type transcriptional activator CmpR low > 73
Escherichia coli BW25113 1.00 b3750 rbsC ribose ABC transporter permease protein (NCBI) 1.00 b2577 yfiE putative transcriptional regulator LYSR-type (VIMSS) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_13410 rbsC ribose ABC transporter permease 0.97 KEDOAH_06865 yfiE Uncharacterized HTH-type transcriptional regulator YfiE — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1707 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) 0.80 GFF2103 LysR family transcriptional regulator YfiE low > 78

Not shown: 46 genomes with orthologs for ECD_03636 only; 1 genomes with orthologs for ECD_02471 only