Conservation of cofitness between ECD_04051 and ECD_01899 in Escherichia coli BL21
13 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BL21 | 1.0 | ECD_04051 | | UPF0719 family inner membrane protein | 1.0 | ECD_01899 | | L,D-transpeptidase linking Lpp to murein | 0.55 | 7 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_10425 | yjfL | UPF0719 inner membrane protein YjfL | 0.97 | HEPCGN_03475 | ldtA | L,D-transpeptidase | low | > 85 |
Escherichia coli ECRC101 | 1.00 | OKFHMN_12195 | yjfL | UPF0719 inner membrane protein YjfL | 0.99 | OKFHMN_25140 | ldtA | L,D-transpeptidase | — | — |
Escherichia coli ECRC99 | 1.00 | KEDOAH_15960 | yjfL | UPF0719 inner membrane protein YjfL | 0.99 | KEDOAH_02970 | ldtA | L,D-transpeptidase | — | — |
Escherichia coli ECRC102 | 1.00 | NIAGMN_10045 | yjfL | UPF0719 inner membrane protein YjfL | 0.99 | NIAGMN_22645 | ldtA | L,D-transpeptidase | — | — |
Escherichia coli BW25113 | 1.00 | b4184 | yjfL | conserved inner membrane protein (NCBI) | 1.00 | b1990 | erfK | conserved protein with NAD(P)-binding Rossmann-fold domain (NCBI) | low | > 76 |
Escherichia coli ECRC101 | 1.00 | MCAODC_02710 | yjfL | UPF0719 inner membrane protein YjfL | 0.99 | MCAODC_20250 | ldtA | L,D-transpeptidase | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03858 | | hypothetical protein | 0.98 | OHPLBJKB_01718 | | putative L,D-transpeptidase ErfK/SrfK | low | > 73 |
Escherichia coli ECRC98 | 1.00 | JDDGAC_15835 | yjfL | UPF0719 inner membrane protein YjfL | 0.99 | JDDGAC_29270 | ldtA | L,D-transpeptidase | — | — |
Escherichia coli ECOR27 | 0.99 | NOLOHH_04455 | yjfL | UPF0719 inner membrane protein YjfL | 0.99 | NOLOHH_16050 | ldtA | L,D-transpeptidase | — | — |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS24290 | | DUF350 domain-containing protein | 0.97 | ECOLIN_RS11615 | | L,D-transpeptidase | — | — |
Escherichia fergusonii Becca | 0.99 | EFB2_04351 | | hypothetical protein | 0.97 | EFB2_01899 | | putative L,D-transpeptidase ErfK/SrfK | low | > 86 |
Escherichia coli ECRC62 | 0.99 | BNILDI_07030 | yjfL | UPF0719 inner membrane protein YjfL | 0.99 | BNILDI_14880 | ldtA | L,D-transpeptidase | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF838 | | Membrane protein with DUF350 domain | 0.80 | GFF3970 | | L,D-transpeptidase YbiS | low | > 78 |
Not shown: 25 genomes with orthologs for ECD_04051 only; 3 genomes with orthologs for ECD_01899 only