Conservation of cofitness between DDA3937_RS11070 and DDA3937_RS17185 in Dickeya dadantii 3937
13 genomes with putative orthologs of both genes
Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Dickeya dadantii 3937 | 1.0 | DDA3937_RS11070 | | diguanylate cyclase | 1.0 | DDA3937_RS17185 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | 0.52 | 19 |
Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS08060 | | diguanylate cyclase | 0.87 | HER17_RS03950 | | bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | low | > 75 |
Klebsiella michiganensis M5al | 0.33 | BWI76_RS03520 | | diguanylate cyclase | 0.80 | BWI76_RS02730 | | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | low | > 92 |
Escherichia coli ECOR38 | 0.32 | HEPCGN_26495 | dosC | diguanylate cyclase DosC | 0.79 | HEPCGN_10240 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | low | > 87 |
Escherichia coli ECRC101 | 0.32 | MCAODC_16640 | dosC | diguanylate cyclase DosC | 0.79 | MCAODC_02560 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | low | > 87 |
Escherichia coli ECOR27 | 0.32 | NOLOHH_18945 | dosC | diguanylate cyclase DosC | 0.79 | NOLOHH_04305 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.32 | OHPLBJKB_02227 | | Diguanylate cyclase DosC | 0.79 | OHPLBJKB_03820 | | '2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase' transl_table=11 | low | > 73 |
Escherichia coli ECRC102 | 0.32 | NIAGMN_25430 | dosC | diguanylate cyclase DosC | 0.79 | NIAGMN_09895 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | — | — |
Escherichia coli ECRC100 | 0.32 | OKFHMN_01300 | dosC | diguanylate cyclase DosC | 0.79 | OKFHMN_12045 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | low | > 80 |
Escherichia coli ECRC98 | 0.32 | JDDGAC_03790 | dosC | diguanylate cyclase DosC | 0.78 | JDDGAC_15685 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | low | > 86 |
Escherichia coli ECRC62 | 0.32 | BNILDI_17430 | dosC | diguanylate cyclase DosC | 0.79 | BNILDI_07215 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | low | > 75 |
Escherichia coli BW25113 | 0.32 | b1490 | yddV | predicted diguanylate cyclase (RefSeq) | 0.79 | b4213 | cpdB | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (NCBI) | low | > 76 |
Escherichia coli BL21 | 0.32 | ECD_01448 | | diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator | 0.79 | ECD_04085 | | 2':3'-cyclic-nucleotide 2'-phosphodiesterase | — | — |
Escherichia coli ECRC99 | 0.32 | KEDOAH_27140 | dosC | diguanylate cyclase DosC | 0.79 | KEDOAH_16110 | cpdB | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | — | — |
Not shown: 3 genomes with orthologs for DDA3937_RS11070 only; 37 genomes with orthologs for DDA3937_RS17185 only