Conservation of cofitness between CSW01_07810 and CSW01_10080 in Vibrio cholerae E7946 ATCC 55056

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07810 glycerophosphoryl diester phosphodiesterase 1.0 CSW01_10080 4-amino-4-deoxychorismate lyase 0.67 13
Fusobacterium nucleatum SB010 0.26 HUW76_01715 glycerophosphodiester phosphodiesterase 0.14 HUW76_10200 aminotransferase class IV low > 35
Azospirillum sp. SherDot2 0.24 MPMX19_00062 Glycerophosphodiester phosphodiesterase, cytoplasmic 0.17 MPMX19_04995 D-alanine aminotransferase low > 112
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_4506 Glycerophosphodiester phosphodiesterase 0.25 Psyr_1650 aminodeoxychorismate lyase apoprotein low > 86
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_4506 Glycerophosphodiester phosphodiesterase 0.25 Psyr_1650 aminodeoxychorismate lyase apoprotein low > 86
Pantoea sp. MT58 0.23 IAI47_01610 glycerophosphodiester phosphodiesterase 0.30 IAI47_12055 aminodeoxychorismate lyase low > 76
Pantoea agglomerans CFBP13505 P0401 0.23 PagCFBP13505_RS18125 glycerophosphodiester phosphodiesterase 0.28 PagCFBP13505_RS05280 aminodeoxychorismate lyase low > 74
Dickeya dianthicola ME23 0.22 DZA65_RS11295 glycerophosphoryl diester phosphodiesterase 0.32 DZA65_RS13640 aminodeoxychorismate lyase — —
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_1230 Glycerophosphoryl diester phosphodiesterase 0.22 B158DRAFT_1750 aminodeoxychorismate lyase low > 40
Erwinia amylovora T8 0.22 OLJFJH_04310 glycerophosphodiester phosphodiesterase 0.32 OLJFJH_15515 aminodeoxychorismate lyase low > 58
Serratia liquefaciens MT49 0.22 IAI46_01010 glycerophosphodiester phosphodiesterase 0.33 IAI46_09805 aminodeoxychorismate lyase low > 87
Rahnella sp. WP5 0.22 EX31_RS14740 glycerophosphodiester phosphodiesterase 0.30 EX31_RS24450 aminodeoxychorismate lyase low > 89
Dickeya dianthicola 67-19 0.21 HGI48_RS10830 glycerophosphoryl diester phosphodiesterase 0.33 HGI48_RS13170 aminodeoxychorismate lyase — —
Pectobacterium carotovorum WPP14 0.21 HER17_RS00630 glycerophosphodiester phosphodiesterase 0.33 HER17_RS08665 aminodeoxychorismate lyase low > 75
Escherichia coli BW25113 0.20 b3449 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase (NCBI) 0.33 b1096 pabC 4-amino-4-deoxychorismate lyase (NCBI) low > 76
Klebsiella michiganensis M5al 0.20 BWI76_RS26285 glycerophosphodiester phosphodiesterase 0.32 BWI76_RS11105 aminodeoxychorismate lyase low > 92
Escherichia coli BL21 0.20 ECD_03298 glycerophosphodiester phosphodiesterase, cytosolic 0.33 ECD_01092 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex — —
Shewanella loihica PV-4 0.20 Shew_0554 glycerophosphoryl diester phosphodiesterase (RefSeq) 0.26 Shew_1577 aminotransferase, class IV (RefSeq) 0.31 27
Enterobacter asburiae PDN3 0.20 EX28DRAFT_4281 Glycerophosphoryl diester phosphodiesterase 0.33 EX28DRAFT_1833 aminodeoxychorismate lyase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_00254 Glycerophosphodiester phosphodiesterase, cytoplasmic 0.33 OHPLBJKB_02570 Aminodeoxychorismate lyase low > 74
Escherichia coli ECRC100 0.20 OKFHMN_16790 ugpQ glycerophosphodiester phosphodiesterase 0.33 OKFHMN_03560 pabC aminodeoxychorismate lyase low > 79
Escherichia coli ECRC98 0.20 JDDGAC_20420 ugpQ glycerophosphodiester phosphodiesterase 0.33 JDDGAC_07220 pabC aminodeoxychorismate lyase low > 87
Escherichia coli ECRC102 0.20 NIAGMN_14560 ugpQ glycerophosphodiester phosphodiesterase 0.33 NIAGMN_24270 pabC aminodeoxychorismate lyase — —
Escherichia coli ECRC99 0.20 KEDOAH_11350 ugpQ glycerophosphodiester phosphodiesterase 0.33 KEDOAH_24195 pabC aminodeoxychorismate lyase — —
Shewanella sp. ANA-3 0.20 Shewana3_0585 glycerophosphoryl diester phosphodiesterase (RefSeq) 0.28 Shewana3_1764 aminodeoxychorismate lyase apoprotein (RefSeq) — —
Escherichia fergusonii Becca 0.20 EFB2_00373 Glycerophosphodiester phosphodiesterase, cytoplasmic 0.33 EFB2_02879 Aminodeoxychorismate lyase low > 86
Escherichia coli ECRC101 0.20 MCAODC_07320 ugpQ glycerophosphodiester phosphodiesterase 0.33 MCAODC_22920 pabC aminodeoxychorismate lyase low > 87
Escherichia coli ECOR27 0.19 NOLOHH_08580 ugpQ glycerophosphodiester phosphodiesterase 0.33 NOLOHH_21090 pabC aminodeoxychorismate lyase low > 76
Klebsiella pneumoniae MKP103 0.19 KDGMDA_07160 glycerophosphodiester phosphodiesterase 0.31 KDGMDA_18710 aminodeoxychorismate lyase low > 95
Shewanella oneidensis MR-1 0.19 SO0587 glycerophosphoryl diester phosphodiesterase, putative (NCBI ptt file) 0.29 SO2615 pabC 4-amino-4-deoxychorismate lyase (NCBI ptt file) 0.34 10
Escherichia coli ECRC62 0.19 BNILDI_02925 ugpQ glycerophosphodiester phosphodiesterase 0.33 BNILDI_19250 pabC aminodeoxychorismate lyase low > 75
Escherichia coli ECOR38 0.19 HEPCGN_15610 ugpQ glycerophosphodiester phosphodiesterase 0.32 HEPCGN_23920 pabC aminodeoxychorismate lyase low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF559 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.29 GFF3378 Aminodeoxychorismate lyase (EC 4.1.3.38) low > 78
Escherichia coli Nissle 1917 0.19 ECOLIN_RS19725 glycerophosphodiester phosphodiesterase 0.33 ECOLIN_RS06330 aminodeoxychorismate lyase low > 55
Pseudomonas segetis P6 0.19 ACVTMO_RS06145 glycerophosphodiester phosphodiesterase 0.28 ACVTMO_RS10325 pabC aminodeoxychorismate lyase low > 75
Enterobacter sp. TBS_079 0.18 MPMX20_04325 Glycerophosphodiester phosphodiesterase, cytoplasmic 0.28 MPMX20_01776 Aminodeoxychorismate lyase low > 85
Erwinia tracheiphila HP pepo 2.2 0.17 IJEDHG_07970 ugpQ glycerophosphodiester phosphodiesterase 0.33 IJEDHG_00665 pabC aminodeoxychorismate lyase low > 61
Alteromonas macleodii MIT1002 0.17 MIT1002_00492 Glycerophosphoryl diester phosphodiesterase 0.29 MIT1002_01736 Aminodeoxychorismate lyase low > 70
Pseudomonas putida KT2440 0.17 PP_2152 glycerophosphoryl diester phosphodiesterase 0.23 PP_1917 4-amino-4-deoxychorismate lyase low > 96
Pseudomonas sp. DMC3 0.17 GFF1290 Glycerophosphodiester phosphodiesterase, cytoplasmic 0.26 GFF4754 Aminodeoxychorismate lyase low > 89
Marinobacter adhaerens HP15 0.17 HP15_2244 glycerophosphoryl diester phosphodiesterase 0.17 HP15_2209 4-amino-4-deoxychorismate lyase low > 73
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_3920 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 0.24 Pf1N1B4_448 Aminodeoxychorismate lyase (EC 4.1.3.38) low > 87
Pseudomonas sp. BP01 0.16 JOY50_RS25120 glycerophosphodiester phosphodiesterase 0.24 JOY50_RS16775 pabC aminodeoxychorismate lyase low > 84
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS07730 glycerophosphodiester phosphodiesterase 0.26 PFLU_RS23040 aminodeoxychorismate lyase low > 109
Pseudomonas simiae WCS417 0.16 PS417_07655 glycerophosphodiester phosphodiesterase 0.25 PS417_21425 4-amino-4-deoxychorismate lyase low > 88
Pseudomonas lactucae CFBP13502 0.16 GEMAOFIL_01663 Glycerophosphodiester phosphodiesterase, cytoplasmic 0.25 GEMAOFIL_04429 Aminodeoxychorismate lyase low > 96
Pseudomonas orientalis W4I3 0.16 QF045_RS10300 glycerophosphodiester phosphodiesterase family protein 0.26 QF045_RS23505 aminodeoxychorismate lyase low > 93
Pseudomonas fluorescens SBW25 0.16 PFLU_RS07730 glycerophosphodiester phosphodiesterase 0.26 PFLU_RS23040 aminodeoxychorismate lyase low > 109
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_00385 glycerophosphodiester phosphodiesterase 0.24 AO353_01350 4-amino-4-deoxychorismate lyase low > 101
Pseudomonas sp. S08-1 0.16 OH686_22010 Glycerophosphoryl diester phosphodiesterase 0.28 OH686_22155 aminodeoxychorismate lyase low > 80
Pseudomonas stutzeri RCH2 0.15 Psest_1664 Glycerophosphoryl diester phosphodiesterase 0.27 Psest_1691 aminodeoxychorismate lyase low > 67
Acinetobacter baumannii LAC-4 0.12 RR41_RS03095 glycerophosphodiester phosphodiesterase 0.24 RR41_RS04800 aminodeoxychorismate lyase low > 55

Not shown: 26 genomes with orthologs for CSW01_07810 only; 25 genomes with orthologs for CSW01_10080 only