Conservation of cofitness between b3115 and b4131 in Escherichia coli BW25113

14 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3115 tdcD propionate kinase/acetate kinase C, anaerobic (RefSeq) 1.0 b4131 cadA lysine decarboxylase 1 (NCBI) 0.47 5
Escherichia coli ECOR38 1.00 HEPCGN_17245 tdcD propionate kinase 1.00 HEPCGN_11110 cadA lysine decarboxylase CadA low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00585 Propionate kinase 1.00 OHPLBJKB_03912 Inducible lysine decarboxylase low > 73
Escherichia coli BL21 1.00 ECD_02982 propionate kinase/acetate kinase C, anaerobic 1.00 ECD_04002 lysine decarboxylase, acid-inducible low > 60
Escherichia coli ECOR27 1.00 NOLOHH_10190 tdcD propionate kinase 1.00 NOLOHH_04740 cadA lysine decarboxylase CadA low > 57
Escherichia coli ECRC62 1.00 BNILDI_01335 tdcD propionate kinase 1.00 BNILDI_06750 cadA lysine decarboxylase CadA — —
Escherichia coli ECRC102 0.99 NIAGMN_16175 tdcD propionate kinase 1.00 NIAGMN_10320 cadA lysine decarboxylase CadA — —
Escherichia coli ECRC98 0.99 JDDGAC_22045 tdcD propionate kinase 1.00 JDDGAC_16110 cadA lysine decarboxylase CadA — —
Escherichia coli ECRC101 0.99 MCAODC_08925 tdcD propionate kinase 1.00 MCAODC_02985 cadA lysine decarboxylase CadA — —
Escherichia coli ECRC101 0.99 OKFHMN_18410 tdcD propionate kinase 1.00 OKFHMN_12475 cadA lysine decarboxylase CadA — —
Escherichia coli ECRC99 0.99 KEDOAH_09735 tdcD propionate kinase 1.00 KEDOAH_15690 cadA lysine decarboxylase CadA — —
Escherichia fergusonii Becca 0.99 EFB2_00699 Propionate kinase 1.00 EFB2_04451 Inducible lysine decarboxylase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17930 propionate kinase 1.00 ECOLIN_RS23905 lysine decarboxylase CadA low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3208 Acetate kinase (EC 2.7.2.1) 0.93 GFF2452 Lysine decarboxylase, inducible (EC 4.1.1.18) low > 78
Variovorax sp. SCN45 0.27 GFF3161 Acetate kinase (EC 2.7.2.1) 0.34 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) — —

Not shown: 33 genomes with orthologs for b3115 only; 5 genomes with orthologs for b4131 only