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Cofit
Protein
Homologs
Top cofit genes for Xcc-8004.553.1 from
Xanthomonas campestris pv. campestris strain 8004
VirK protein
SEED: VirK protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Xcc-8004.222.1
Cysteine desulfurase (EC 2.8.1.7)
no
0.43
2
Xcc-8004.3159.1
Luciferase-like
no
0.41
3
Xcc-8004.226.1
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
0.55
0.41
4
Xcc-8004.777.1
FIG01211805: hypothetical protein
no
0.41
5
Xcc-8004.1592.1
Membrane proteins related to metalloendopeptidases
no
0.40
6
Xcc-8004.4666.1
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)
no
0.37
7
Xcc-8004.2541.1
PilL protein
no
0.37
8
Xcc-8004.263.1
Distant homolog of E. coli HemX protein in Xanthomonadaceae
no
0.36
9
Xcc-8004.3392.1
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8)
no
0.36
10
Xcc-8004.4248.1
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.36
11
Xcc-8004.1102.1
Minor pilin of type IV secretion complex, VirB5
no
0.35
12
Xcc-8004.859.1
Response regulator
no
0.35
13
Xcc-8004.659.1
IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
no
0.35
14
Xcc-8004.4623.1
FIG01210877: hypothetical protein
no
0.34
15
Xcc-8004.1124.1
RidA/YER057c/UK114 superfamily, group 3
no
0.34
16
Xcc-8004.2370.1
Hypothetical protein USSDB1E
no
0.33
17
Xcc-8004.2400.1
hypothetical protein
no
0.33
18
Xcc-8004.1643.1
Amino acid transporter
no
0.33
19
Xcc-8004.5151.1
FIG01210064: hypothetical protein
no
0.33
20
Xcc-8004.764.1
FIG01213873: hypothetical protein
no
0.32
Or look for
negative cofitness