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Cofit
Protein
Homologs
Top cofit genes for Xcc-8004.5098.1 from
Xanthomonas campestris pv. campestris strain 8004
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Xcc-8004.2147.1
avirulence protein
no
0.50
2
Xcc-8004.2515.1
putative membrane protein
no
0.43
3
Xcc-8004.134.1
putative; ORF located using Glimmer/Genemark
no
0.43
4
Xcc-8004.3058.1
N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
no
0.42
5
Xcc-8004.1841.1
DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)
no
0.38
6
Xcc-8004.3393.1
Glutathione peroxidase family protein
no
0.37
7
Xcc-8004.762.1
FIG01210947: hypothetical protein
no
0.37
8
Xcc-8004.2802.1
ATP-grasp enzyme-like protein
no
0.37
9
Xcc-8004.3046.1
Alkaline phosphatase (EC 3.1.3.1)
no
0.37
10
Xcc-8004.3947.1
FIG01210742: hypothetical protein
no
0.36
11
Xcc-8004.1636.1
hypothetical protein
no
0.36
12
Xcc-8004.2284.1
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.35
13
Xcc-8004.1895.1
FIG01210044: hypothetical protein
no
0.34
14
Xcc-8004.480.1
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
no
0.34
15
Xcc-8004.562.1
ATP-dependent RNA helicase RhlE
no
0.33
16
Xcc-8004.1000.1
putative; ORF located using Glimmer/Genemark
no
0.33
17
Xcc-8004.4641.1
Secreted and surface protein containing fasciclin-like repeats
no
0.33
18
Xcc-8004.876.1
Mobile element protein
no
0.33
19
Xcc-8004.3510.1
Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5)
no
0.33
20
Xcc-8004.2046.1
hypothetical protein
no
0.33
Or look for
negative cofitness