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Cofit
Protein
Homologs
Top cofit genes for Xcc-8004.4982.1 from
Xanthomonas campestris pv. campestris strain 8004
Protein yjbJ
SEED: Protein yjbJ
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Xcc-8004.5199.1
hypothetical protein
no
0.52
2
Xcc-8004.1303.1
Inner membrane protein of type IV secretion of T-DNA complex, VirB6
no
0.42
3
Xcc-8004.3201.1
hypothetical protein
no
0.38
4
Xcc-8004.4917.1
outer membrane lipoprotein Blc
no
0.38
5
Xcc-8004.3387.1
transcriptional regulator
0.48
0.37
6
Xcc-8004.5064.1
hypothetical protein
no
0.37
7
Xcc-8004.414.1
putative; ORF located using Glimmer/Genemark
no
0.37
8
Xcc-8004.5071.1
FIG01210955: hypothetical protein
no
0.36
9
Xcc-8004.795.1
Membrane protein, putative
no
0.36
10
Xcc-8004.300.1
Isoaspartyl aminopeptidase (EC 3.4.19.5) @ Asp-X dipeptidase
no
0.36
11
Xcc-8004.3653.1
FIG01212122: hypothetical protein
no
0.36
12
Xcc-8004.1455.1
hypothetical protein
no
0.35
13
Xcc-8004.279.1
FIG01210420: hypothetical protein
no
0.35
14
Xcc-8004.2995.1
GCN5-related N-acetyltransferase; Histone acetyltransferase HPA2 and related acetyltransferases
no
0.35
15
Xcc-8004.892.1
Coupling protein VirD4, ATPase required for T-DNA transfer
no
0.34
16
Xcc-8004.1099.1
Inner membrane protein of type IV secretion of T-DNA complex, VirB6
no
0.34
17
Xcc-8004.3082.1
2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58)
no
0.34
18
Xcc-8004.4789.1
NADPH dependent preQ0 reductase (EC 1.7.1.13)
no
0.34
19
Xcc-8004.4183.1
Transcriptional regulator
no
0.34
20
Xcc-8004.484.1
Pca regulon regulatory protein PcaR
no
0.33
Or look for
negative cofitness