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Cofit
Protein
Homologs
Top cofit genes for Xcc-8004.4904.1 from
Xanthomonas campestris pv. campestris strain 8004
O-antigen acetylase
SEED: O-antigen acetylase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Xcc-8004.4508.1
Kinase
no
0.44
2
Xcc-8004.4616.1
Sensor histidine kinase
no
0.43
3
Xcc-8004.31.1
Peptidase
no
0.42
4
Xcc-8004.3013.1
hypothetical protein
no
0.40
5
Xcc-8004.1270.1
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
no
0.40
6
Xcc-8004.734.1
Malonate decarboxylase alpha subunit
0.34
0.40
7
Xcc-8004.665.1
FIG01211711: hypothetical protein
no
0.40
8
Xcc-8004.1426.1
Transmembrane transport protein
no
0.40
9
Xcc-8004.930.1
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)
no
0.37
10
Xcc-8004.3476.1
short chain dehydrogenase
no
0.37
11
Xcc-8004.1491.1
Glycosyltransferase
no
0.37
12
Xcc-8004.93.1
FIG01211857: hypothetical protein
no
0.36
13
Xcc-8004.4473.1
FIG01212400: hypothetical protein
no
0.36
14
Xcc-8004.4506.1
membrane protein WxcD
no
0.36
15
Xcc-8004.3791.1
Beta-xylosidase (EC 3.2.1.37)
no
0.36
16
Xcc-8004.884.1
Rod shape-determining protein MreD
no
0.36
17
Xcc-8004.1581.1
hypothetical protein
no
0.36
18
Xcc-8004.2610.1
FIG01211014: hypothetical protein
no
0.35
19
Xcc-8004.2082.1
Xanthan biosynthesis glycosyltransferase GumD
0.31
0.35
20
Xcc-8004.1878.1
Protein of unknown function DUF541
no
0.35
Or look for
negative cofitness