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Cofit
Protein
Homologs
Top cofit genes for Xcc-8004.3670.1 from
Xanthomonas campestris pv. campestris strain 8004
Response regulator
SEED: Response regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Xcc-8004.869.1
Methanol dehydrogenase large subunit protein (EC 1.1.99.8)
no
0.44
2
Xcc-8004.4244.1
Gluconolactonase
no
0.38
3
Xcc-8004.5290.1
Tetracycline-efflux transporter
no
0.37
4
Xcc-8004.4800.1
FIG074102: hypothetical protein
no
0.37
5
Xcc-8004.4856.1
putative; ORF located using Glimmer/Genemark
no
0.36
6
Xcc-8004.4903.1
Oxidoreductase
no
0.34
7
Xcc-8004.1796.1
hypothetical protein
no
0.34
8
Xcc-8004.5079.1
hypothetical protein
no
0.33
9
Xcc-8004.2568.1
DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster
no
0.33
10
Xcc-8004.237.1
FIG01211085: hypothetical protein
no
0.33
11
Xcc-8004.57.1
Transcriptional repressor, BlaI/MecI family
no
0.33
12
Xcc-8004.3066.1
putative large secreted protein
no
0.32
13
Xcc-8004.1922.1
Metallopeptidase
no
0.32
14
Xcc-8004.2503.1
Inner membrane protein of type IV secretion of T-DNA complex, VirB6
no
0.32
15
Xcc-8004.2059.1
hypothetical protein
no
0.32
16
Xcc-8004.3891.1
alanyl dipeptidyl peptidase
no
0.31
17
Xcc-8004.1459.1
Two-component system regulatory protein
no
0.31
18
Xcc-8004.5310.1
dicarboxylate transport protein
no
0.30
19
Xcc-8004.3070.1
Beta-galactosidase (EC 3.2.1.23)
no
0.30
20
Xcc-8004.2562.1
FIG01210329: hypothetical protein
no
0.30
Or look for
negative cofitness