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Cofit
Protein
Homologs
Top cofit genes for Xcc-8004.336.1 from
Xanthomonas campestris pv. campestris strain 8004
Alpha/beta hydrolase
SEED: Alpha/beta hydrolase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Xcc-8004.157.1
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
no
0.45
2
Xcc-8004.1248.1
Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
no
0.41
3
Xcc-8004.2398.1
hypothetical protein
no
0.41
4
Xcc-8004.3507.1
Lipid A export ATP-binding/permease protein MsbA
0.20
0.40
5
Xcc-8004.3276.1
Transcriptional regulator, LysR family
0.16
0.39
6
Xcc-8004.1257.1
Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)
0.88
0.38
7
Xcc-8004.1258.1
Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2)
0.91
0.38
8
Xcc-8004.1260.1
Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25)
0.91
0.37
9
Xcc-8004.937.1
Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2)
no
0.37
10
Xcc-8004.1562.1
3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)
0.88
0.36
11
Xcc-8004.4084.1
Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25)
0.87
0.36
12
Xcc-8004.206.1
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
no
0.36
13
Xcc-8004.3448.1
hypothetical protein
no
0.36
14
Xcc-8004.4314.1
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
0.88
0.35
15
Xcc-8004.841.1
Valine--pyruvate aminotransferase (EC 2.6.1.66)
0.37
0.35
16
Xcc-8004.5036.1
Ferric siderophore transport system, periplasmic binding protein TonB
no
0.35
17
Xcc-8004.4087.1
Sulfate and thiosulfate binding protein CysP
0.87
0.35
18
Xcc-8004.5308.1
Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA
no
0.35
19
Xcc-8004.2222.1
FIG01209757: hypothetical protein
no
0.34
20
Xcc-8004.652.1
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)
no
0.34
Or look for
negative cofitness