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Cofit
Protein
Homologs
Top cofit genes for Xcc-8004.180.1 from
Xanthomonas campestris pv. campestris strain 8004
RhsD protein
SEED: RhsD protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Xcc-8004.280.1
3-oxoacyl-[ACP] synthase III in alkane synthesis cluster
no
0.44
2
Xcc-8004.4494.1
hypothetical protein
no
0.42
3
Xcc-8004.318.1
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
no
0.42
4
Xcc-8004.5209.1
Putative predicted metal-dependent hydrolase
no
0.40
5
Xcc-8004.3748.1
(AJ250023) putative polyketide synthase
no
0.40
6
Xcc-8004.728.1
Putative outer membrane protein
no
0.39
7
Xcc-8004.1045.1
hypothetical protein
no
0.39
8
Xcc-8004.319.1
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
no
0.39
9
Xcc-8004.371.1
transcriptional regulator
no
0.39
10
Xcc-8004.1702.1
Proteins containing SET domain
no
0.39
11
Xcc-8004.3272.1
Hydroxylase
no
0.39
12
Xcc-8004.4493.1
sugar translocase
no
0.38
13
Xcc-8004.5114.1
ATP-dependent DNA helicase UvrD/PcrA
no
0.38
14
Xcc-8004.4518.1
Cystathionine beta-synthase (EC 4.2.1.22)
no
0.38
15
Xcc-8004.4492.1
Bifunctional acetyl transferase/isomerase
no
0.38
16
Xcc-8004.2089.1
Xanthan biosynthesis glucuronosyltransferase GumK
no
0.37
17
Xcc-8004.135.1
Aldehyde dehydrogenase (EC 1.2.1.3)
no
0.37
18
Xcc-8004.1200.1
hypothetical protein
no
0.37
19
Xcc-8004.3686.1
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
no
0.36
20
Xcc-8004.5254.1
Transcriptional regulator, LacI family
no
0.36
Or look for
negative cofitness