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  • Top cofit genes for Xcc-8004.139.1 from Xanthomonas campestris pv. campestris strain 8004

    Ku domain protein
    SEED: Ku domain protein
    KEGG: DNA end-binding protein Ku

    Rank Hit Name Description Conserved? Cofitness  
    1 Xcc-8004.670.1 ice nucleation protein no 0.45
    2 Xcc-8004.1510.1 Ribosomal-protein-S5p-alanine acetyltransferase 0.55 0.43
    3 Xcc-8004.1400.1 Cobalamin synthase (EC 2.7.8.26) no 0.41
    4 Xcc-8004.449.1 Integrase no 0.40
    5 Xcc-8004.2282.1 tRNA:Cm32/Um32 methyltransferase no 0.40
    6 Xcc-8004.5244.1 FIG01209927: hypothetical protein no 0.40
    7 Xcc-8004.4906.1 Glucosyltransferase no 0.39
    8 Xcc-8004.3463.1 COG0553: Superfamily II DNA/RNA helicases, SNF2 family 0.25 0.39
    9 Xcc-8004.1263.1 hypothetical protein no 0.39
    10 Xcc-8004.4607.1 Histidinol phosphatase and related hydrolases of the PHP family no 0.39
    11 Xcc-8004.3161.1 ABC transporter ATP-binding protein no 0.38
    12 Xcc-8004.872.1 surface antigen gene 0.17 0.38
    13 Xcc-8004.1675.1 hypothetical protein no 0.38
    14 Xcc-8004.1779.1 Two-component response regulator CreB no 0.37
    15 Xcc-8004.821.1 Sulfate permease no 0.37
    16 Xcc-8004.4657.1 D-amino acid oxidase no 0.36
    17 Xcc-8004.3312.1 IroE protein no 0.36
    18 Xcc-8004.3128.1 COGs COG3737 no 0.35
    19 Xcc-8004.2278.1 ribonuclease no 0.35
    20 Xcc-8004.214.1 UPF0028 protein YchK no 0.35

    Or look for negative cofitness