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Cofit
Protein
Homologs
Top cofit genes for Xcc-8004.102.1 from
Xanthomonas campestris pv. campestris strain 8004
oxidoreductase ylbE
SEED: oxidoreductase ylbE
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Xcc-8004.2779.1
Flagellar basal-body rod protein FlgC
no
0.39
2
Xcc-8004.3192.1
Cytochrome c heme lyase subunit CcmL
no
0.38
3
Xcc-8004.220.1
L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation
no
0.38
4
Xcc-8004.1351.1
Type IV fimbrial assembly, ATPase PilB
no
0.38
5
Xcc-8004.201.1
TRAP-type C4-dicarboxylate transport system, periplasmic component
no
0.36
6
Xcc-8004.2021.1
Type IV fimbrial biogenesis protein PilV
no
0.36
7
Xcc-8004.1897.1
Acyl-CoA thioester hydrolase
no
0.36
8
Xcc-8004.4367.1
FIG01211104: hypothetical protein
no
0.36
9
Xcc-8004.340.1
Organic hydroperoxide resistance protein
no
0.35
10
Xcc-8004.5399.1
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
no
0.35
11
Xcc-8004.2022.1
Type IV fimbrial biogenesis protein PilW
no
0.35
12
Xcc-8004.1585.1
Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-)
no
0.34
13
Xcc-8004.2025.1
Type IV fimbrial biogenesis protein PilY1
no
0.34
14
Xcc-8004.3088.1
Thiol peroxidase, Bcp-type (EC 1.11.1.15)
0.34
0.34
15
Xcc-8004.1346.1
Type IV fimbrial assembly protein PilC
no
0.34
16
Xcc-8004.4498.1
Mobile element protein
no
0.34
17
Xcc-8004.3013.1
hypothetical protein
no
0.33
18
Xcc-8004.3894.1
putative; ORF located using Glimmer/Genemark
no
0.33
19
Xcc-8004.3708.1
hypothetical protein
no
0.33
20
Xcc-8004.2574.1
FIG004780: hypothetical protein in PFGI-1-like cluster
no
0.33
Or look for
negative cofitness