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  • Top cofit genes for SMa1578 from Sinorhizobium meliloti 1021

    CpaA2 pilus assembly protein
    SEED: Type IV prepilin peptidase TadV/CpaA
    KEGG: prepilin peptidase CpaA

    Rank Hit Name Description Conserved? Cofitness  
    1 SM_b20621 sugar uptake ABC transporter permease no 0.32
    2 SM_b21368 cytochrome c oxidase subunit II no 0.32
    3 SMa0914 hypothetical protein 0.31 0.32
    4 SM_b20750 dehydrogenase no 0.32
    5 SMc02236 DNA repair nuclease, ligase-associated (TIGR04123) (from data) no 0.30
    6 SMa2327 sensor protein no 0.30
    7 SMc00033 hypothetical protein no 0.30
    8 SMa0872 hypothetical protein no 0.30
    9 SM_b20488 hypothetical protein no 0.29
    10 SMc02514 periplasmic binding ABC transporter protein no 0.28
    11 SM_b21586 glutathione synthetase no 0.28
    12 SMa0937 hypothetical protein no 0.28
    13 SMc03942 hypothetical protein no 0.28
    14 SMc03034 flagellar basal body L-ring protein no 0.28
    15 SM_b21327 dTDP-4-dehydrorhamnose reductase no 0.28
    16 SMc03130 hypothetical protein no 0.28
    17 SMa1896 methionine sulfoxide reductase A no 0.28
    18 SM_b20450 regulatory protein no 0.28
    19 SMc01227 glycerol trinitrate (GTN) reductase no 0.28
    20 SM_b20221 epoxide hydrolase no 0.28

    Or look for negative cofitness