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  • Top cofit genes for SMa0870 from Sinorhizobium meliloti 1021

    NodD1 nod-box dependent transcriptional activator
    SEED: Nodulation protein D (transcriptional regulator, LysR family)
    KEGG: LysR family transcriptional regulator, nod-box dependent transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 SMc01275 ribosomal large subunit pseudouridine synthase C protein 0.11 0.49
    2 SMc03863 50S ribosomal protein L19 no 0.48
    3 SMc00482 hypothetical protein no 0.47
    4 SMc03933 sarcosine oxidase subunit B protein no 0.47
    5 SMc00325 hypothetical protein no 0.47
    6 SMc00458 transcriptional regulator no 0.46
    7 SMc03931 sarcosine oxidase subunit alpha no 0.46
    8 SMc04003 50S ribosomal protein L36 no 0.46
    9 SMc02757 hypothetical protein no 0.45
    10 SMc00566 hypothetical protein no 0.45
    11 SM_b20819 ferredoxin no 0.45
    12 SMc01099 tRNA pseudouridine synthase A 0.29 0.44
    13 SMc03855 hypothetical protein no 0.44
    14 SMc02659 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein no 0.44
    15 SMc00565 50S ribosomal protein L9 no 0.44
    16 SMc00129 sensor histidine kinase no 0.44
    17 SMa5000 hypothetical protein no 0.43
    18 SMc00349 GTP-binding protein LepA 0.30 0.43
    19 SMc00647 ribosomal large subunit pseudouridine synthase no 0.43
    20 SMc04382 beta-(1,2)-glucan production associated transmembrane protein no 0.43

    Or look for negative cofitness