• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for SMa0143 from Sinorhizobium meliloti 1021

    RNA polymerase ECF sigma factor
    SEED: RNA polymerase sigma-54 factor RpoN
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 SM_b21468 hypothetical protein no 0.38
    2 SMc01824 hypothetical protein no 0.35
    3 SM_b21191 surface saccharide ABC transporter ATP-binding/membrane spanning protein no 0.34
    4 SMc01665 hypothetical protein no 0.31
    5 SMa2237 hypothetical protein no 0.30
    6 SM_b21638 phenylacetic acid degradation protein 0.32 0.29
    7 SMa1447 Permease, MFS no 0.29
    8 SMa1650 ABC transporter permease no 0.29
    9 SMa0226 dehydrogenase no 0.29
    10 SMc02871 ABC transporter for N-Acetyl-D-glucosamine, permease protein 2 (from data) no 0.29
    11 SM_b20968 hypothetical protein no 0.29
    12 SM_b20932 endo-1,3-1,4-beta-glycanase, C-terminal secretion signal protein no 0.28
    13 SMc02869 N-Acetyl-D-glucosamine ABC transport system, ATPase component (from data) no 0.28
    14 SM_b20404 aldehyde dehydrogenase no 0.28
    15 SMa1726 TetR family transcriptional regulator no 0.28
    16 SMa1957 hypothetical protein no 0.28
    17 SMc02061 biotin-regulated protein no 0.28
    18 SMc00932 DNA mismatch repair protein 0.48 0.28
    19 SMa0117 hypothetical protein no 0.27
    20 SM_b21423 sugar uptake ABC transporter permease no 0.27

    Or look for negative cofitness