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Cofit
Protein
Homologs
Top cofit genes for SM_b20496 from
Sinorhizobium meliloti 1021
GMC oxidoreductase
SEED: Choline dehydrogenase (EC 1.1.99.1)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
SM
_b20856
sugar uptake ABC transporter substrate-binding protein precursor
no
0.34
2
SM
_b21221
ABC transporter for D-Glucosamine, periplasmic substrate-binding protein
(from data)
no
0.34
3
SM
_b21219
ABC transporter for D-Glucosamine, permease component 1
(from data)
no
0.29
4
SMc03891
amino acid-binding periplasmic ABC transporter protein
no
0.28
5
SMc01956
hypothetical protein
no
0.27
6
SM
_b20100
dehydrogenase
no
0.27
7
SMa0329
short chain alcohol dehydrogenase-related dehydrogenase
no
0.27
8
SMc00917
ATP phosphoribosyltransferase (EC 2.4.2.17)
(from data)
no
0.27
9
SM
_b22002
epoxide hydrolase
no
0.26
10
SMa0089
hypothetical protein
no
0.26
11
SM
_b20133
hypothetical protein
no
0.26
12
SMc00142
molybdopterin-guanine dinucleotide biosynthesis protein
no
0.26
13
SMc00186
ABC transporter ATP-binding protein
no
0.26
14
SM
_b21463
glycosyl hydrolase, 6-phospho-beta-glucosidase
no
0.25
15
SMc01004
phosphoribosyl-AMP cyclohydrolase
no
0.25
16
SMc02609
transcriptional regulator
no
0.25
17
SMc02569
imidazole glycerol phosphate synthase subunit HisF
no
0.25
18
SM
_b21216
ABC transporter for D-Glucosamine, ATPase component
(from data)
no
0.25
19
SM
_b21220
ABC transporter for D-Glucosamine, permease component 2
(from data)
no
0.25
20
SMc03249
hypothetical protein
no
0.25
Or look for
negative cofitness