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  • Top cofit genes for SM_b20008 from Sinorhizobium meliloti 1021

    ATP-dependent DNA ligase
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) LigC
    KEGG: DNA ligase (ATP)

    Rank Hit Name Description Conserved? Cofitness  
    1 SM_b20010 hypothetical protein no 0.28
    2 SMc05011 bacteriophage DNA-binding transcription regulator no 0.27
    3 SMc04174 signal peptide protein no 0.27
    4 SMa2321 UvrD2 DNA helicase no 0.26
    5 SM_b21347 pectin degradation protein no 0.26
    6 SM_b21043 hypothetical protein no 0.26
    7 SMc02041 short chain dehydrogenase no 0.26
    8 SMa1483 dehydrogenase no 0.26
    9 SM_b20881 hypothetical protein no 0.26
    10 SM_b21639 phenylacetate-CoA oxygenase subunit PaaB no 0.26
    11 SMa0041 quinone oxidoreductase no 0.25
    12 SM_b20900 hypothetical protein no 0.24
    13 SMc01971 aldehyde dehydrogenase no 0.24
    14 SMc00385 hypothetical protein no 0.24
    15 SM_b20102 acetoin catabolism regulatory protein no 0.24
    16 SMa1523 NuoG2 NADH I chain G 2 no 0.23
    17 SMc02276 nicotinate phosphoribosyltransferase no 0.23
    18 SM_b21532 phosphate acetyltransferase no 0.23
    19 SM_b20555 hypothetical protein no 0.23
    20 SMa2414 RhtA rhizobactin receptor precursor no 0.22

    Or look for negative cofitness