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  • Top cofit genes for Rv3833 from Mycobacterium tuberculosis H37Rv

    Transcriptional regulatory protein (probably AraC-family)

    Rank Hit Name Description Conserved? Cofitness  
    1 Rv1291c Conserved hypothetical secreted protein no 0.45
    2 Rv3358 Toxin RelK no 0.40
    3 Rv2352c PPE family protein PPE38 no 0.31
    4 Rv2154c FtsW-like protein FtsW no 0.30
    5 Rv0261c Probable integral membrane nitrite extrusion protein NarK3 (nitrite facilitator) no 0.30
    6 Rv1946c Possible lipoprotein no 0.29
    7 Rv1935c Possible enoyl-CoA hydratase EchA13 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) no 0.29
    8 Rv3093c Hypothetical oxidoreductase no 0.28
    9 Rv2528c Probable restriction system protein Mrr no 0.28
    10 Rv0971c Probable enoyl-CoA hydratase EchA7 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) no 0.28
    11 Rv3086 Probable zinc-type alcohol dehydrogenase AdhD (aldehyde reductase) no 0.28
    12 Rv1156 Conserved protein no 0.27
    13 Rv2068c Class a beta-lactamase BlaC no 0.26
    14 Rv3414c Probable alternative RNA polymerase sigma-D factor SigD no 0.26
    15 Rv1410c Aminoglycosides/tetracycline-transport integral membrane protein no 0.26
    16 Rv2209 Probable conserved integral membrane protein no 0.25
    17 Rv2205c Conserved hypothetical protein no 0.25
    18 Rv0547c Possible oxidoreductase no 0.25
    19 Rv3821 Probable conserved integral membrane protein no 0.24
    20 Rv1710 Possible segregation and condensation protein ScpB no 0.24

    Or look for negative cofitness