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Cofit
Protein
Homologs
Top cofit genes for Rv3425 from
Mycobacterium tuberculosis H37Rv
PPE family protein PPE57
SEED: PPE family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rv0917
Possible glycine betaine transport integral membrane protein BetP
no
0.34
2
Rv2948c
P-hydroxybenzoyl-AMP ligase FadD22
no
0.34
3
Rv2417c
Conserved protein
no
0.32
4
Rv1270c
Possible lipoprotein LprA
no
0.31
5
Rv0761c
Possible zinc-containing alcohol dehydrogenase NAD dependent AdhB
no
0.30
6
Rv0471c
Hypothetical protein
no
0.30
7
Rv1366
Hypothetical protein
no
0.28
8
Rv1811
Possible Mg2+ transport P-type ATPase C MgtC
no
0.28
9
Rv0659c
Toxin MazF2
no
0.28
10
Rv1902c
Probable sialic acid-transport integral membrane protein NanT
no
0.27
11
Rv3224
Possible iron-regulated short-chain dehydrogenase/reductase
no
0.26
12
Rv3034c
Possible transferase
no
0.26
13
Rv1289
Unknown protein
no
0.25
14
Rv2661c
Hypothetical protein
no
0.25
15
Rv2527
Possible toxin VapC17
no
0.25
16
Rv0873
Probable acyl-CoA dehydrogenase FadE10
no
0.25
17
Rv0043c
Probable transcriptional regulatory protein (probably GntR-family)
no
0.24
18
Rv1680
Hypothetical protein
no
0.24
19
Rv2350c
Membrane-associated phospholipase C 2 PlcB
no
0.24
20
Rv3374
Probable enoyl-CoA hydratase (fragment) EchA18.1 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase)
no
0.24
Or look for
negative cofitness