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  • Top cofit genes for Rv3425 from Mycobacterium tuberculosis H37Rv

    PPE family protein PPE57
    SEED: PPE family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rv0917 Possible glycine betaine transport integral membrane protein BetP no 0.34
    2 Rv2948c P-hydroxybenzoyl-AMP ligase FadD22 no 0.34
    3 Rv2417c Conserved protein no 0.32
    4 Rv1270c Possible lipoprotein LprA no 0.31
    5 Rv0761c Possible zinc-containing alcohol dehydrogenase NAD dependent AdhB no 0.30
    6 Rv0471c Hypothetical protein no 0.30
    7 Rv1366 Hypothetical protein no 0.28
    8 Rv1811 Possible Mg2+ transport P-type ATPase C MgtC no 0.28
    9 Rv0659c Toxin MazF2 no 0.28
    10 Rv1902c Probable sialic acid-transport integral membrane protein NanT no 0.27
    11 Rv3224 Possible iron-regulated short-chain dehydrogenase/reductase no 0.26
    12 Rv3034c Possible transferase no 0.26
    13 Rv1289 Unknown protein no 0.25
    14 Rv2661c Hypothetical protein no 0.25
    15 Rv2527 Possible toxin VapC17 no 0.25
    16 Rv0873 Probable acyl-CoA dehydrogenase FadE10 no 0.25
    17 Rv0043c Probable transcriptional regulatory protein (probably GntR-family) no 0.24
    18 Rv1680 Hypothetical protein no 0.24
    19 Rv2350c Membrane-associated phospholipase C 2 PlcB no 0.24
    20 Rv3374 Probable enoyl-CoA hydratase (fragment) EchA18.1 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase) no 0.24

    Or look for negative cofitness