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  • Top cofit genes for Rv3390 from Mycobacterium tuberculosis H37Rv

    Probable conserved lipoprotein LpqD
    SEED: PROBABLE CONSERVED LIPOPROTEIN LPQD

    Rank Hit Name Description Conserved? Cofitness  
    1 Rv3514 PE-PGRS family protein PE_PGRS57 no 0.46
    2 Rv3507 PE-PGRS family protein PE_PGRS53 no 0.46
    3 Rv3343c PPE family protein PPE54 no 0.46
    4 Rv2742c Conserved hypothetical arginine rich protein no 0.44
    5 Rv1061 Conserved protein no 0.43
    6 Rv2395 Probable conserved integral membrane protein no 0.43
    7 Rv2741 PE-PGRS family protein PE_PGRS47 no 0.42
    8 Rv1091 PE-PGRS family protein PE_PGRS22 no 0.41
    9 Rv3345c PE-PGRS family protein PE_PGRS50 no 0.41
    10 Rv1087 PE-PGRS family protein PE_PGRS21 no 0.41
    11 Rv0279c PE-PGRS family protein PE_PGRS4 no 0.41
    12 Rv0278c PE-PGRS family protein PE_PGRS3 no 0.41
    13 Rv0835 Possible lipoprotein LpqQ no 0.40
    14 Rv1079 Cystathionine gamma-synthase MetB (CGS) (O-succinylhomoserine [thiol]-lyase) no 0.39
    15 Rv3347c PPE family protein PPE55 no 0.38
    16 Rv2396 PE-PGRS family protein PE_PGRS41 no 0.38
    17 Rv0977 PE-PGRS family protein PE_PGRS16 no 0.38
    18 Rv0754 PE-PGRS family protein PE_PGRS11 no 0.38
    19 Rv3510c Conserved protein no 0.38
    20 Rv1090 Probable cellulase CelA2b (endo-1,4-beta-glucanase) (endoglucanase) (carboxymethyl cellulase) no 0.38

    Or look for negative cofitness