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  • Top cofit genes for Rv3360 from Mycobacterium tuberculosis H37Rv

    Conserved hypothetical protein
    SEED: ABC transporter ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rv3202c Possible ATP-dependent DNA helicase no 0.31
    2 Rv3585 DNA repair protein RadA (DNA repair protein SMS) no 0.29
    3 Rv3201c Probable ATP-dependent DNA helicase no 0.28
    4 Rv1020 Probable transcription-repair coupling factor Mfd (TRCF) no 0.28
    5 Rv1191 Conserved protein no 0.28
    6 Rv0613c Unknown protein no 0.27
    7 Rv0508 Conserved hypothetical protein no 0.27
    8 Rv0207c Conserved hypothetical protein no 0.27
    9 Rv2095c Proteasome accessory factor C PafC no 0.26
    10 Rv1188 Probable proline dehydrogenase no 0.26
    11 Rv0003 DNA replication and repair protein RecF (single-strand DNA binding protein) no 0.25
    12 Rv0937c DNA end-binding protein, Mku no 0.24
    13 Rv0813c Conserved protein no 0.24
    14 Rv2517c Unknown protein no 0.24
    15 Rv2634c PE-PGRS family protein PE_PGRS46 no 0.24
    16 Rv1450c PE-PGRS family protein PE_PGRS27 no 0.23
    17 Rv1109c Conserved protein no 0.23
    18 Rv1277 Conserved hypothetical protein no 0.22
    19 Rv3365c Conserved protein no 0.22
    20 Rv2527 Possible toxin VapC17 no 0.22

    Or look for negative cofitness