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  • Top cofit genes for Rv3202c from Mycobacterium tuberculosis H37Rv

    Possible ATP-dependent DNA helicase
    SEED: ATP-dependent DNA helicase SCO5183
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 Rv2095c Proteasome accessory factor C PafC no 0.87
    2 Rv3201c Probable ATP-dependent DNA helicase no 0.85
    3 Rv2096c Proteasome accessory factor B PafB no 0.80
    4 Rv3364c Conserved protein no 0.79
    5 Rv2737c RecA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RecA intein)]. no 0.76
    6 Rv0003 DNA replication and repair protein RecF (single-strand DNA binding protein) no 0.75
    7 Rv1108c Probable exodeoxyribonuclease VII (large subunit) XseA (exonuclease VII large subunit) no 0.65
    8 Rv3585 DNA repair protein RadA (DNA repair protein SMS) no 0.62
    9 Rv3365c Conserved protein no 0.61
    10 Rv1020 Probable transcription-repair coupling factor Mfd (TRCF) no 0.60
    11 Rv1109c Conserved protein no 0.52
    12 Rv1278 Hypothetical protein no 0.52
    13 Rv1277 Conserved hypothetical protein no 0.49
    14 Rv3273 Probable transmembrane carbonic anhydrase (carbonate dehydratase) (carbonic dehydratase) no 0.48
    15 Rv0474 Probable transcriptional regulatory protein no 0.45
    16 Rv3272 Conserved hypothetical protein no 0.44
    17 Rv1634 Possible drug efflux membrane protein no 0.42
    18 Rv0146 Possible S-adenosylmethionine-dependent methyltransferase no 0.39
    19 Rv1194c Conserved protein no 0.38
    20 Rv3431c Possible transposase (fragment) no 0.37

    Or look for negative cofitness