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  • Top cofit genes for Rv2621c from Mycobacterium tuberculosis H37Rv

    Possible transcriptional regulatory protein
    SEED: Putative transcriptional regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rv2232 Protein tyrosine kinase transcriptional regulatory protein PtkA no 0.31
    2 Rv0121c Conserved protein no 0.28
    3 Rv0877 Conserved hypothetical protein no 0.28
    4 Rv0576 Probable transcriptional regulatory protein (possibly ArsR-family) no 0.28
    5 Rv0762c Conserved hypothetical protein no 0.27
    6 Rv0068 Probable oxidoreductase no 0.27
    7 Rv0365c Conserved protein no 0.27
    8 Rv3366 Probable tRNA/rRNA methylase SpoU (tRNA/rRNA methyltransferase) no 0.26
    9 Rv0975c Probable acyl-CoA dehydrogenase FadE13 no 0.26
    10 Rv1732c Conserved protein no 0.26
    11 Rv0977 PE-PGRS family protein PE_PGRS16 no 0.26
    12 Rv0522 Probable GABA permease GabP (4-amino butyrate transport carrier) (GAMA-aminobutyrate permease) no 0.25
    13 Rv3870 ESX conserved component EccCa1. ESX-1 type VII secretion system protein. Possible transmembrane protein. no 0.25
    14 Rv2173 Probable geranylgeranyl pyrophosphate synthetase IdsA2 (ggppsase) (GGPP synthetase) (geranylgeranyl diphosphate synthase) no 0.25
    15 Rv1885c Chorismate mutase no 0.25
    16 Rv1628c Conserved protein no 0.25
    17 Rv1259 Probable uracil DNA glycosylase, UdgB no 0.25
    18 Rv2730 Hypothetical protein no 0.25
    19 Rv0822c Conserved protein no 0.24
    20 Rv0963c Conserved hypothetical protein no 0.24

    Or look for negative cofitness