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  • Top cofit genes for Rv2402 from Mycobacterium tuberculosis H37Rv

    Conserved protein
    SEED: Glucoamylase (EC 3.2.1.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 Rv2741 PE-PGRS family protein PE_PGRS47 no 0.59
    2 Rv2740 Epoxide hydrolase no 0.59
    3 Rv1087 PE-PGRS family protein PE_PGRS21 no 0.58
    4 Rv0279c PE-PGRS family protein PE_PGRS4 no 0.56
    5 Rv3345c PE-PGRS family protein PE_PGRS50 no 0.56
    6 Rv0746 PE-PGRS family protein PE_PGRS9 no 0.55
    7 Rv0747 PE-PGRS family protein PE_PGRS10 no 0.53
    8 Rv1088 PE family protein PE9 no 0.53
    9 Rv2395 Probable conserved integral membrane protein no 0.53
    10 Rv2742c Conserved hypothetical arginine rich protein no 0.53
    11 Rv3343c PPE family protein PPE54 no 0.53
    12 Rv3511 PE-PGRS family protein PE_PGRS55 no 0.52
    13 Rv2394 Probable gamma-glutamyltranspeptidase precursor GgtB (gamma-glutamyltransferase) (glutamyl transpeptidase) no 0.52
    14 Rv1090 Probable cellulase CelA2b (endo-1,4-beta-glucanase) (endoglucanase) (carboxymethyl cellulase) no 0.52
    15 Rv1091 PE-PGRS family protein PE_PGRS22 no 0.52
    16 Rv0278c PE-PGRS family protein PE_PGRS3 no 0.52
    17 Rv3509c Probable acetohydroxyacid synthase IlvX (acetolactate synthase) no 0.50
    18 Rv3514 PE-PGRS family protein PE_PGRS57 no 0.50
    19 Rv2735c Conserved hypothetical protein no 0.50
    20 Rv3344c PE-PGRS family protein PE_PGRS49 no 0.50

    Or look for negative cofitness