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Cofit
Protein
Homologs
Top cofit genes for Rv2001 from
Mycobacterium tuberculosis H37Rv
Conserved hypothetical protein
SEED: Acyl-ACP thioesterase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rv3303c
NAD(P)H quinone reductase LpdA
no
0.42
2
Rv3891c
Possible ESAT-6 like protein EsxD
no
0.42
3
Rv1550
Probable fatty-acid-CoA ligase FadD11 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase)
no
0.40
4
Rv2686c
Antibiotic-transport integral membrane leucine and alanine and valine rich protein ABC transporter
no
0.38
5
Rv0959
Conserved hypothetical protein
no
0.38
6
Rv1939
Probable oxidoreductase
no
0.38
7
Rv3883c
Membrane-anchored mycosin MycP1 (serine protease) (subtilisin-like protease) (subtilase-like) (mycosin-1)
no
0.37
8
Rv1357c
Conserved hypothetical protein
no
0.37
9
Rv1321
Conserved hypothetical protein
no
0.36
10
Rv2551c
Conserved hypothetical protein
no
0.35
11
Rv1428c
Conserved hypothetical protein
no
0.35
12
Rv1775
Conserved hypothetical protein
no
0.35
13
Rv3885c
ESX conserved component EccE2. ESX-2 type VII secretion system protein. Possible membrane protein.
no
0.35
14
Rv3089
Probable chain-fatty-acid-CoA ligase FadD13 (fatty-acyl-CoA synthetase)
no
0.34
15
Rv3170
Probable flavin-containing monoamine oxidase AofH (amine oxidase) (MAO)
no
0.34
16
Rv3058c
Possible transcriptional regulatory protein (probably TetR-family)
no
0.34
17
Rv0449c
Conserved hypothetical protein
no
0.34
18
Rv3822
Conserved hypothetical protein
no
0.34
19
Rv3332
Probable N-acetylglucosamine-6-phosphate deacetylase NagA (GlcNAc 6-P deacetylase)
no
0.33
20
Rv0499
Conserved hypothetical protein
no
0.33
Or look for
negative cofitness