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  • Top cofit genes for Rv1178 from Mycobacterium tuberculosis H37Rv

    Probable aminotransferase
    SEED: N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17)

    Rank Hit Name Description Conserved? Cofitness  
    1 Rv1638 Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA no 0.33
    2 Rv0092 Cation transporter P-type ATPase a CtpA no 0.33
    3 Rv3434c Possible conserved transmembrane protein no 0.31
    4 Rv1791 PE family protein PE19 no 0.30
    5 Rv1792 ESAT-6 like protein EsxM no 0.28
    6 Rv2752c Conserved hypothetical protein no 0.27
    7 Rv2259 S-nitrosomycothiol reductase MscR no 0.27
    8 Rv0097 Possible oxidoreductase no 0.27
    9 Rv3135 PPE family protein PPE50 no 0.25
    10 Rv3136 PPE family protein PPE51 no 0.25
    11 Rv2681 Conserved hypothetical alanine rich protein no 0.25
    12 Rv2728c Conserved alanine rich protein no 0.25
    13 Rv1233c Conserved hypothetical membrane protein no 0.24
    14 Rv2054 Conserved protein no 0.24
    15 Rv0448c Conserved hypothetical protein no 0.24
    16 Rv2506 Probable transcriptional regulatory protein (probably TetR-family) no 0.24
    17 Rv2633c Hypothetical protein no 0.23
    18 Rv1626 Probable two-component system transcriptional regulator no 0.23
    19 Rv0474 Probable transcriptional regulatory protein no 0.23
    20 Rv1170 N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase MshB (GlcNAc-Ins deacetylase) no 0.23

    Or look for negative cofitness