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  • Top cofit genes for Rv0355c from Mycobacterium tuberculosis H37Rv

    PPE family protein PPE8
    SEED: PPE family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Rv0473 Possible conserved transmembrane protein no 0.32
    2 Rv0305c PPE family protein PPE6 no 0.29
    3 Rv0805 Class III cyclic nucleotide phosphodiesterase (cNMP PDE) no 0.28
    4 Rv1182 Probable conserved polyketide synthase associated protein PapA3 no 0.28
    5 Rv2772c Probable conserved transmembrane protein no 0.28
    6 Rv1520 Probable sugar transferase no 0.27
    7 Rv3154 Probable NADH dehydrogenase I (chain J) NuoJ (NADH-ubiquinone oxidoreductase chain J) no 0.27
    8 Rv3663c Probable dipeptide-transport ATP-binding protein ABC transporter DppD no 0.27
    9 Rv3357 Antitoxin RelJ no 0.26
    10 Rv0304c PPE family protein PPE5 no 0.26
    11 Rv2503c Probable succinyl-CoA:3-ketoacid-coenzyme A transferase (beta subunit) ScoB (3-oxo-acid:CoA transferase) (OXCT B) (succinyl CoA:3-oxoacid CoA-transferase) no 0.26
    12 Rv0594 Mce-family protein Mce2F no 0.26
    13 Rv3226c Conserved hypothetical protein no 0.25
    14 Rv0409 Probable acetate kinase AckA (acetokinase) no 0.25
    15 Rv1679 Possible acyl-CoA dehydrogenase FadE16 no 0.25
    16 Rv0079 Unknown protein no 0.25
    17 Rv0871 Probable cold shock-like protein B CspB no 0.25
    18 Rv1124 Probable epoxide hydrolase EphC (epoxide hydratase) no 0.25
    19 Rv1204c Conserved hypothetical protein no 0.25
    20 Rv0457c Probable peptidase no 0.25

    Or look for negative cofitness