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Cofit
Protein
Homologs
Top cofit genes for Rv0355c from
Mycobacterium tuberculosis H37Rv
PPE family protein PPE8
SEED: PPE family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Rv0473
Possible conserved transmembrane protein
no
0.32
2
Rv0305c
PPE family protein PPE6
no
0.29
3
Rv0805
Class III cyclic nucleotide phosphodiesterase (cNMP PDE)
no
0.28
4
Rv1182
Probable conserved polyketide synthase associated protein PapA3
no
0.28
5
Rv2772c
Probable conserved transmembrane protein
no
0.28
6
Rv1520
Probable sugar transferase
no
0.27
7
Rv3154
Probable NADH dehydrogenase I (chain J) NuoJ (NADH-ubiquinone oxidoreductase chain J)
no
0.27
8
Rv3663c
Probable dipeptide-transport ATP-binding protein ABC transporter DppD
no
0.27
9
Rv3357
Antitoxin RelJ
no
0.26
10
Rv0304c
PPE family protein PPE5
no
0.26
11
Rv2503c
Probable succinyl-CoA:3-ketoacid-coenzyme A transferase (beta subunit) ScoB (3-oxo-acid:CoA transferase) (OXCT B) (succinyl CoA:3-oxoacid CoA-transferase)
no
0.26
12
Rv0594
Mce-family protein Mce2F
no
0.26
13
Rv3226c
Conserved hypothetical protein
no
0.25
14
Rv0409
Probable acetate kinase AckA (acetokinase)
no
0.25
15
Rv1679
Possible acyl-CoA dehydrogenase FadE16
no
0.25
16
Rv0079
Unknown protein
no
0.25
17
Rv0871
Probable cold shock-like protein B CspB
no
0.25
18
Rv1124
Probable epoxide hydrolase EphC (epoxide hydratase)
no
0.25
19
Rv1204c
Conserved hypothetical protein
no
0.25
20
Rv0457c
Probable peptidase
no
0.25
Or look for
negative cofitness