Top cofit genes for Rv0116c from Mycobacterium tuberculosis H37Rv

Probable L,D-transpeptidase LdtA
SEED: FIG00545237: hypothetical protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	Rv1823		Conserved protein	no	0.46
2	Rv0012		Probable conserved membrane protein	no	0.45
3	Rv0483		Probable conserved lipoprotein LprQ	no	0.40
4	Rv1280c		Probable periplasmic oligopeptide-binding lipoprotein OppA	no	0.40
5	Rv3586		Conserved hypothetical protein	no	0.39
6	Rv0645c		Methoxy mycolic acid synthase 1 MmaA1 (methyl mycolic acid synthase 1) (MMA1) (hydroxy mycolic acid synthase)	no	0.38
7	Rv1825		Conserved protein	no	0.38
8	Rv3273		Probable transmembrane carbonic anhydrase (carbonate dehydratase) (carbonic dehydratase)	no	0.37
9	Rv0129c		Secreted antigen 85-C FbpC (85C) (antigen 85 complex C) (AG58C) (mycolyl transferase 85C) (fibronectin-binding protein C)	no	0.37
10	Rv3058c		Possible transcriptional regulatory protein (probably TetR-family)	no	0.37
11	Rv0003		DNA replication and repair protein RecF (single-strand DNA binding protein)	no	0.34
12	Rv0265c		Probable periplasmic iron-transport lipoprotein	no	0.34
13	Rv1824		Conserved hypothetical membrane protein	no	0.34
14	Rv1020		Probable transcription-repair coupling factor Mfd (TRCF)	no	0.33
15	Rv0007		Possible conserved membrane protein	no	0.33
16	Rv2672		Possible secreted protease	no	0.33
17	Rv0871		Probable cold shock-like protein B CspB	no	0.32
18	Rv3852		Possible histone-like protein Hns	no	0.32
19	Rv3272		Conserved hypothetical protein	no	0.32
20	Rv2938		Probable daunorubicin-dim-transport integral membrane protein ABC transporter DrrC	no	0.32

Or look for negative cofitness