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Cofit
Protein
Homologs
Top cofit genes for RS_RS11465 from
Ralstonia solanacearum GMI1000
signal peptidase
SEED: VirK protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RS
_RS05305
excinuclease ABC subunit UvrC
no
0.54
2
RS
_RS13330
mechanosensitive ion channel family protein
no
0.53
3
RS
_RS13230
RNA-binding S4 domain-containing protein
0.47
0.53
4
RS
_RS05940
DNA-binding response regulator
no
0.52
5
RS
_RS15635
type II secretion system protein N
no
0.51
6
RS
_RS08100
D-alanyl-D-alanine endopeptidase
no
0.50
7
RS
_RS07685
phosphate ABC transporter ATP-binding protein
no
0.50
8
RS
_RS20330
AcrB/AcrD/AcrF family protein
no
0.50
9
RS
_RS23955
membrane protein
no
0.50
10
RS
_RS21755
XRE family transcriptional regulator
no
0.49
11
RS
_RS25235
hypothetical protein
no
0.49
12
RS
_RS18515
APC family permease
no
0.49
13
RS
_RS07675
phosphate ABC transporter permease subunit PstC
no
0.49
14
RS
_RS18060
sulfite exporter TauE/SafE family protein
no
0.49
15
RS
_RS24350
SCO family protein
no
0.48
16
RS
_RS18790
flagella basal body P-ring formation protein FlgA
no
0.48
17
RS
_RS14605
cytochrome o ubiquinol oxidase subunit I
no
0.47
18
RS
_RS00190
copper chaperone PCu(A)C
no
0.47
19
RS
_RS00145
4-aminobutyrate--2-oxoglutarate transaminase
no
0.47
20
RS
_RS26145
type III secretion system effector protein
no
0.47
Or look for
negative cofitness