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Cofit
Protein
Homologs
Top cofit genes for RR42_RS37420 from
Cupriavidus basilensis FW507-4G11
AraC family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS13200
stationary phase survival protein SurE
no
0.36
2
RR42
_RS03320
transcriptional regulator
no
0.34
3
RR42
_RS15935
C4-dicarboxylate ABC transporter
no
0.34
4
RR42
_RS19915
SPFH domain/Band 7 family protein 2
0.23
0.33
5
RR42
_RS34810
branched-chain amino acid ABC transporter substrate-binding protein
no
0.32
6
RR42
_RS13205
NADPH:quinone oxidoreductase
no
0.32
7
RR42
_RS22955
isocitrate dehydrogenase
no
0.32
8
RR42
_RS13220
histidine kinase
no
0.32
9
RR42
_RS16940
ABC transporter permease
no
0.32
10
RR42
_RS25345
ABC transporter permease
no
0.31
11
RR42
_RS13235
ABC transporter permease
0.33
0.31
12
RR42
_RS23660
hypothetical protein
no
0.31
13
RR42
_RS21085
3-isopropylmalate dehydratase
no
0.30
14
RR42
_RS07340
oligopeptidase A
no
0.30
15
RR42
_RS16015
membrane protein
0.44
0.30
16
RR42
_RS27140
RND transporter
no
0.30
17
RR42
_RS34375
hypothetical protein
no
0.30
18
RR42
_RS23500
benzene 1,2-dioxygenase
no
0.30
19
RR42
_RS35830
hypothetical protein
no
0.30
20
RR42
_RS19465
AsnC family transcriptional regulator
no
0.30
Or look for
negative cofitness