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Cofit
Protein
Homologs
Top cofit genes for RR42_RS36405 from
Cupriavidus basilensis FW507-4G11
LuxR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS30100
transposase
no
0.38
2
RR42
_RS31025
serine/threonine protein phosphatase
no
0.35
3
RR42
_RS25600
AraC family transcriptional regulator
no
0.34
4
RR42
_RS26195
hypothetical protein
no
0.34
5
RR42
_RS24215
hypothetical protein
no
0.33
6
RR42
_RS31820
short-chain dehydrogenase
no
0.33
7
RR42
_RS15490
NrdR family transcriptional regulator
no
0.33
8
RR42
_RS33810
NIPSNAP family containing protein
no
0.32
9
RR42
_RS13260
CoA-transferase
0.35
0.32
10
RR42
_RS10245
dehydratase
no
0.32
11
RR42
_RS16470
transcriptional regulator
no
0.32
12
RR42
_RS12105
nitrilotriacetate monooxygenase
no
0.31
13
RR42
_RS25185
epimerase
no
0.31
14
RR42
_RS26495
carbon monoxide dehydrogenase
no
0.30
15
RR42
_RS12690
NC domain protein
no
0.30
16
RR42
_RS00680
ABC transporter permease
no
0.30
17
RR42
_RS19655
tRNA-Ala
no
0.30
18
RR42
_RS18335
nitrate ABC transporter ATP-binding protein
no
0.30
19
RR42
_RS05385
LOG family protein
no
0.30
20
RR42
_RS01345
CoA-binding protein
no
0.30
Or look for
negative cofitness