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  • Top cofit genes for RR42_RS36220 from Cupriavidus basilensis FW507-4G11

    nitrate ABC transporter substrate-binding protein
    SEED: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 RR42_RS25800 porin no 0.39
    2 RR42_RS23550 flagellar export protein FliJ no 0.37
    3 RR42_RS23770 hypothetical protein no 0.37
    4 RR42_RS29060 LacI family transcriptional regulator no 0.37
    5 RR42_RS22960 alpha/beta hydrolase no 0.36
    6 RR42_RS36670 sodium:sulfate symporter no 0.36
    7 RR42_RS32210 AraC family transcriptional regulator no 0.35
    8 RR42_RS30595 hypothetical protein no 0.35
    9 RR42_RS30605 ABC transporter substrate-binding protein no 0.35
    10 RR42_RS30335 ATP-binding protein no 0.35
    11 RR42_RS26155 succinate-semialdehyde dehydrogenase no 0.34
    12 RR42_RS22765 carboxyvinyl-carboxyphosphonate phosphorylmutase no 0.34
    13 RR42_RS28055 acetyl-CoA acetyltransferase no 0.34
    14 RR42_RS32825 ATPase no 0.33
    15 RR42_RS26195 hypothetical protein no 0.32
    16 RR42_RS32305 hypothetical protein no 0.32
    17 RR42_RS07265 hypothetical protein no 0.32
    18 RR42_RS27230 DNA-binding protein no 0.32
    19 RR42_RS12750 ATPase no 0.32
    20 RR42_RS07530 ABC transporter permease no 0.32

    Or look for negative cofitness