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Cofit
Protein
Homologs
Top cofit genes for RR42_RS36100 from
Cupriavidus basilensis FW507-4G11
surface antigen
SEED: Outer membrane lipoprotein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS21400
prolyl-tRNA synthetase
no
0.41
2
RR42
_RS04640
DNA mismatch repair protein MutT
no
0.38
3
RR42
_RS23215
DSBA oxidoreductase
no
0.38
4
RR42
_RS13630
4-hydroxybenzoyl-CoA reductase
no
0.37
5
RR42
_RS14630
MFS transporter
no
0.36
6
RR42
_RS19105
magnesium transporter
no
0.36
7
RR42
_RS12440
cytochrome C
no
0.36
8
RR42
_RS14945
hypothetical protein
no
0.35
9
RR42
_RS04395
cysteine ABC transporter substrate-binding protein
no
0.34
10
RR42
_RS13560
propionyl-CoA synthetase
no
0.34
11
RR42
_RS36080
LysR family transcriptional regulator
no
0.33
12
RR42
_RS27370
zinc finger UBP-type protein
no
0.33
13
RR42
_RS18790
hypothetical protein
no
0.33
14
RR42
_RS12400
histidine kinase
no
0.33
15
RR42
_RS20230
LysR family transcriptional regulator
no
0.32
16
RR42
_RS26885
peptidase M20
no
0.32
17
RR42
_RS24120
C4-dicarboxylate ABC transporter substrate-binding protein
no
0.32
18
RR42
_RS05885
hypothetical protein
no
0.32
19
RR42
_RS33320
ABC transporter substrate-binding protein
no
0.31
20
RR42
_RS03520
type VI secretion protein EvpB
no
0.31
Or look for
negative cofitness