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Cofit
Protein
Homologs
Top cofit genes for RR42_RS36020 from
Cupriavidus basilensis FW507-4G11
hemagglutinin
SEED: PE_PGRS family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS03385
sugar kinase
no
0.37
2
RR42
_RS11310
membrane protein
no
0.34
3
RR42
_RS11670
thymidine phosphorylase
no
0.34
4
RR42
_RS27070
membrane protein
no
0.33
5
RR42
_RS22310
LysR family transcriptional regulator
no
0.33
6
RR42
_RS13605
hypothetical protein
no
0.32
7
RR42
_RS05990
aromatic amino acid aminotransferase
no
0.32
8
RR42
_RS16395
hypothetical protein
no
0.32
9
RR42
_RS00925
adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA
no
0.32
10
RR42
_RS06480
glutathione S-transferase
no
0.32
11
RR42
_RS21440
DNA-3-methyladenine glycosylase
no
0.31
12
RR42
_RS26680
hypothetical protein
no
0.30
13
RR42
_RS14580
multidrug DMT transporter permease
no
0.30
14
RR42
_RS01275
aldehyde dehydrogenase
no
0.30
15
RR42
_RS11700
hypothetical protein
no
0.30
16
RR42
_RS04470
prephenate dehydrogenase
no
0.30
17
RR42
_RS09860
hemin-binding outer membrane protein associated with biofilm formation (hmsH)
no
0.29
18
RR42
_RS29625
LysR family transcriptional regulator
no
0.29
19
RR42
_RS05490
NAD(P)H-quinone oxidoreductase
no
0.29
20
RR42
_RS26790
peptide ABC transporter permease
no
0.29
Or look for
negative cofitness