Top cofit genes for RR42_RS35880 from Cupriavidus basilensis FW507-4G11

integrase
SEED: probable integrase/recombinase protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	RR42_RS19930		amine oxidase	no	0.43
2	RR42_RS23645		flagellar hook protein	no	0.42
3	RR42_RS35820		flagellar transcriptional regulator FlhC	0.44	0.41
4	RR42_RS32340		hypothetical protein	no	0.40
5	RR42_RS24685		hypothetical protein	no	0.39
6	RR42_RS15885		deoxyribodipyrimidine photolyase	no	0.38
7	RR42_RS35760		flagellar biosynthesis regulator FlhF	no	0.37
8	RR42_RS13245		ABC transporter substrate-binding protein	no	0.37
9	RR42_RS36335		enoyl-CoA hydratase	no	0.37
10	RR42_RS34830		chemotaxis protein CheW	no	0.36
11	RR42_RS00485		potassium-transporting ATPase subunit B	no	0.36
12	RR42_RS23680		LacI family transcriptional regulator	no	0.35
13	RR42_RS07340		oligopeptidase A	no	0.35
14	RR42_RS12760		hypothetical protein	no	0.35
15	RR42_RS15965		formate dehydrogenase	0.52	0.35
16	RR42_RS16740		hypothetical protein	no	0.35
17	RR42_RS29215		cyclopropane-fatty-acyl-phospholipid synthase	no	0.35
18	RR42_RS19950		MFS transporter	no	0.35
19	RR42_RS02885		acetylornithine deacetylase	no	0.34
20	RR42_RS22890		TetR family transcriptional regulator	no	0.34

Or look for negative cofitness