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Gene
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Cofit
Protein
Homologs
Top cofit genes for RR42_RS33585 from
Cupriavidus basilensis FW507-4G11
3-keto-5-aminohexanoate cleavage protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS11235
peptide ABC transporter substrate-binding protein
no
0.36
2
RR42
_RS17390
ATP-dependent DNA helicase RecG
no
0.31
3
RR42
_RS27110
hypothetical protein
no
0.30
4
RR42
_RS17785
4-oxalocrotonate tautomerase
no
0.30
5
RR42
_RS05910
DNA repair protein
no
0.30
6
RR42
_RS32110
peptide ABC transporter permease
no
0.30
7
RR42
_RS09650
autotransporter
no
0.29
8
RR42
_RS25825
histidine kinase
no
0.29
9
RR42
_RS26540
3-phosphoglycerate dehydrogenase
no
0.29
10
RR42
_RS28950
ammonium transporter
no
0.29
11
RR42
_RS28835
gluconate:H+ symporter (gntT)
(from data)
no
0.28
12
RR42
_RS26765
polyketide cyclase
no
0.28
13
RR42
_RS36450
acyl dehydratase
no
0.28
14
RR42
_RS21720
acetoin catabolism protein X
no
0.28
15
RR42
_RS36335
enoyl-CoA hydratase
no
0.28
16
RR42
_RS31055
3-hydroxybutyryl-CoA dehydrogenase
no
0.28
17
RR42
_RS20095
peroxiredoxin
no
0.27
18
RR42
_RS17610
malate dehydrogenase
no
0.27
19
RR42
_RS07085
hypothetical protein
no
0.27
20
RR42
_RS33675
nitrate ABC transporter ATP-binding protein
no
0.27
Or look for
negative cofitness