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Cofit
Protein
Homologs
Top cofit genes for RR42_RS33355 from
Cupriavidus basilensis FW507-4G11
membrane protein
SEED: Probable transmembrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS17645
shikimate dehydrogenase
0.83
0.64
2
RR42
_RS33240
GDP-L-fucose synthase
no
0.63
3
RR42
_RS30660
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
0.84
0.60
4
RR42
_RS05860
phospho-2-dehydro-3-deoxyheptonate aldolase
0.76
0.60
5
RR42
_RS33255
protein-tyrosine phosphatase
no
0.60
6
RR42
_RS19010
shikimate kinase
0.77
0.59
7
RR42
_RS33260
multidrug MFS transporter
no
0.59
8
RR42
_RS04535
cysteine synthase
0.85
0.59
9
RR42
_RS33245
mannose-1-phosphate guanyltransferase
no
0.58
10
RR42
_RS33235
GDP-mannose 4,6-dehydratase
0.59
0.58
11
RR42
_RS30655
LysR family transcriptional regulator
0.84
0.57
12
RR42
_RS14320
O-succinylhomoserine sulfhydrylase
0.85
0.57
13
RR42
_RS06485
chorismate synthase
0.75
0.57
14
RR42
_RS16245
uroporphyrin-III methyltransferase
0.83
0.56
15
RR42
_RS16255
sulfate adenylyltransferase
0.85
0.55
16
RR42
_RS33250
tyrosine protein kinase
0.32
0.55
17
RR42
_RS18300
anthranilate synthase subunit II
0.83
0.55
18
RR42
_RS08365
hypothetical protein
no
0.54
19
RR42
_RS16270
sulfite reductase
0.82
0.54
20
RR42
_RS16250
sulfate adenylyltransferase
0.84
0.54
Or look for
negative cofitness