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Cofit
Protein
Homologs
Top cofit genes for RR42_RS32905 from
Cupriavidus basilensis FW507-4G11
cytosine deaminase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS09380
quinone oxidoreductase
no
0.35
2
RR42
_RS30640
DNA mismatch repair protein MutT
no
0.30
3
RR42
_RS33995
membrane protein
no
0.30
4
RR42
_RS23985
hypothetical protein
no
0.30
5
RR42
_RS01385
5,10-methylenetetrahydrofolate reductase
no
0.30
6
RR42
_RS13975
chemotaxis protein
no
0.30
7
RR42
_RS01160
homoserine O-acetyltransferase
no
0.30
8
RR42
_RS04475
3-phosphoshikimate 1-carboxyvinyltransferase
no
0.30
9
RR42
_RS35135
transcriptional regulator
no
0.29
10
RR42
_RS06485
chorismate synthase
0.49
0.29
11
RR42
_RS10515
fumarylacetoacetate hydrolase
no
0.29
12
RR42
_RS16365
3-oxoacyl-ACP reductase
no
0.29
13
RR42
_RS17645
shikimate dehydrogenase
no
0.29
14
RR42
_RS16255
sulfate adenylyltransferase
no
0.29
15
RR42
_RS30660
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
no
0.29
16
RR42
_RS15035
ZIP zinc transporter
no
0.29
17
RR42
_RS36305
TetR family transcriptional regulator
no
0.28
18
RR42
_RS25805
hypothetical protein
no
0.28
19
RR42
_RS28335
ferredoxin
no
0.28
20
RR42
_RS14365
N-(5'-phosphoribosyl)anthranilate isomerase
no
0.28
Or look for
negative cofitness