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Cofit
Protein
Homologs
Top cofit genes for RR42_RS32160 from
Cupriavidus basilensis FW507-4G11
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
RR42
_RS03330
GYD family protein
no
0.44
2
RR42
_RS29800
integrase
no
0.38
3
RR42
_RS19915
SPFH domain/Band 7 family protein 2
no
0.37
4
RR42
_RS00550
hypothetical protein
no
0.37
5
RR42
_RS00835
DSBA oxidoreductase
no
0.36
6
RR42
_RS12760
hypothetical protein
no
0.35
7
RR42
_RS23555
ATP synthase
no
0.35
8
RR42
_RS02875
serine/threonine protein kinase
no
0.34
9
RR42
_RS10925
hypothetical protein
no
0.34
10
RR42
_RS18550
LysR family transcriptional regulator
no
0.33
11
RR42
_RS35800
chemotaxis protein CheW
no
0.33
12
RR42
_RS03300
RND transporter
no
0.33
13
RR42
_RS15265
hypothetical protein
no
0.33
14
RR42
_RS35930
DNA repair exonuclease
no
0.33
15
RR42
_RS23670
DSBA oxidoreductase
no
0.32
16
RR42
_RS09065
multidrug DMT transporter permease
no
0.32
17
RR42
_RS16855
alpha/beta hydrolase
no
0.32
18
RR42
_RS05785
hypothetical protein
no
0.32
19
RR42
_RS34810
branched-chain amino acid ABC transporter substrate-binding protein
no
0.32
20
RR42
_RS00385
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
no
0.32
Or look for
negative cofitness