Top cofit genes for RR42_RS32065 from Cupriavidus basilensis FW507-4G11

protocatechuate 3,4-dioxygenase, beta subunit (EC 1.13.11.3) (from data)
Original annotation: protocatechuate 3,4-dioxygenase
SEED: Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3)
KEGG: protocatechuate 3,4-dioxygenase, beta subunit

Rank Hit Name Description Conserved? Cofitness  
1 RR42_RS32060 protocatechuate 3,4-dioxygenase 0.96 0.93
2 RR42_RS32055 3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2) (from data) 0.97 0.76
3 RR42_RS32050 AraC family transcriptional regulator no 0.70
4 RR42_RS35925 3-oxoadipate CoA-transferase 0.93 0.60
5 RR42_RS29055 AraC family transcriptional regulator 0.89 0.59
6 RR42_RS21205 2-isopropylmalate synthase 0.22 0.55
7 RR42_RS32070 LysR family transcriptional regulator 0.96 0.52
8 RR42_RS34380 dihydrolipoamide dehydrogenase no 0.49
9 RR42_RS35915 beta-ketoadipyl CoA thiolase 0.95 0.49
10 RR42_RS03030 required for 4-hydroxybenzoate transport, together with NodT, MFP, and FUSC proteins (RR42_RS03040, RR42_RS03035, and RR42_RS03025) (from data) no 0.47
11 RR42_RS05985 esterase 0.69 0.46
12 RR42_RS32565 MFS transporter no 0.45
13 RR42_RS03040 Outer membrane protein (NodT-like) required for 4-hydroxybenzoate transport, together with FUSC, MFP, and DUF1656 proteins (RR42_RS03025, RR42_RS03035, and RR42_RS03030) (from data) 0.24 0.45
14 RR42_RS03025 Inner membrane protein (FUSC-like) required for 4-hydroxybenzoate transport, together with NodT, MFP, and DUF1656 proteins (RR42_RS03040, RR42_RS03035, and RR42_RS03030) (from data) no 0.41
15 RR42_RS02495 cardiolipin synthase; exported protein 0.27 0.41
16 RR42_RS01400 5-formyltetrahydrofolate cyclo-ligase no 0.40
17 RR42_RS26555 tRNA-Met no 0.39
18 RR42_RS05210 malic enzyme 0.44 0.39
19 RR42_RS34385 glutathione peroxidase no 0.39
20 RR42_RS06010 phosphotyrosine protein phosphatase no 0.37

Or look for negative cofitness